How Strong is Hydrogen Bonding to Amide Nitrogen?
Vladimir Y Mikshiev1, Alexander F Pozharskii2, Alexander Filarowski3,4
1Institute of Chemistry, St. Petersburg State University, Universitetskii pr. 26, 198504, St. Petersburg, Russian Federation.
Protonation of amide nitrogen is crucial for biological processes. This study investigates intramolecular hydrogen bonding in undistorted amides using novel "amide proton sponges," revealing borderline moderate to weak interactions.
Area of Science:
- Organic Chemistry
- Physical Chemistry
- Biochemistry
Background:
- Protonation of the carboxamide nitrogen is vital for in vivo and in vitro processes like isomerization and hydrolysis.
- While protonation in distorted amides is well-studied, data on undistorted amides, particularly concerning hydrogen bonding to amide nitrogen, is limited.
- Intramolecular hydrogen bonding to amide nitrogen is considered an initial stage of proton transfer, meriting further investigation of its enthalpy.
Purpose of the Study:
- To investigate the enthalpy of intramolecular hydrogen bonding involving the amide nitrogen atom in undistorted amides.
- To utilize novel "amide proton sponges" derived from peri-substituted naphthalenes as model systems for this study.
Main Methods:
- Synthesis and investigation of peri-substituted naphthalenes with a protonated dimethylamino group adjacent to the amide nitrogen.
- Utilized X-ray analysis, Nuclear Magnetic Resonance (NMR) spectroscopy, and basicity measurements.
- Performed quantum chemical calculations to analyze the hydrogen bonding interactions.
Main Results:
- Confirmed the existence of an intramolecular hydrogen bond involving the amide nitrogen atom in the synthesized model compounds.
- Characterized the hydrogen bond strength as being on the borderline between moderate and weak interactions, with enthalpies ranging from 2-7 kcal/mol.
- The "amide proton sponges" effectively modeled intramolecular hydrogen bonding in undistorted amides.
Conclusions:
- Established a model system for studying intramolecular hydrogen bonds in undistorted amides.
- Quantified the enthalpy of these borderline moderate-to-weak hydrogen bonds involving amide nitrogen.
- The findings contribute to understanding fundamental amide chemistry relevant to biological and chemical processes.
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