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Weighted gene co-expression network analysis identifies CCNA2 as a treatment target of prostate cancer through
Rui Yang1, Yang Du1, Lei Wang1
1Department of Urology, Ren min Hospital of Wuhan University, Wuhan, Hubei, 430060, China.
Abstract:
Prostate cancer is a malignant tumor disease that seriously harms the lives of middle-aged and elderly men. Weighted gene co-expression analysis can be used to construct gene co-expression networks to explore gene sets and genes that are significantly correlated with clinical features. In this study, the transcriptome data of prostate cancer on TCGA was analyzed by weighted gene co-expression network, and the gene with a significant correlation with disease Gleason stage and tumor T stage was identified: CCNA2. CCNA2 was significantly associated with biochemical recurrence, disease-free survival and overall survival rate of prostate cancer. The ability of cancer cell proliferation, invasion and metastasis was decreased after down-regulated expression of CCNA2 in prostate cancer cell lines. Flow cytometry revealed that tumor cells were arrested in the S phase after down-regulated the expression of CCNA2. Taken together, we used WGCNA and obtain a gene CCNA2 which is significantly associated with the prognosis of prostate cancer, which may be an indicator of the prognosis of prostate cancer and a new therapeutic target.
Insights
This study identified CCNA2 as a key gene linked to prostate cancer prognosis. Downregulating CCNA2 reduced cancer cell proliferation and invasion, suggesting it as a potential therapeutic target for prostate cancer.
Area of Science:
- Oncology
- Genomics
- Bioinformatics
Background:
- Prostate cancer poses a significant health threat to middle-aged and elderly men.
- Gene co-expression network analysis aids in identifying genes correlated with clinical features.
Purpose of the Study:
- To identify genes significantly associated with prostate cancer clinical features using weighted gene co-expression network analysis (WGCNA).
- To investigate the role of identified genes in prostate cancer progression and survival.
Main Methods:
- Weighted gene co-expression network analysis (WGCNA) of prostate cancer transcriptome data from TCGA.
- Identification of CCNA2 as a gene significantly correlated with Gleason and T stages.
- Functional assays in prostate cancer cell lines to assess the impact of CCNA2 downregulation.
Main Results:
- CCNA2 was identified as significantly associated with Gleason stage and T stage in prostate cancer.
- CCNA2 expression correlated with biochemical recurrence, disease-free survival, and overall survival.
- Downregulation of CCNA2 reduced prostate cancer cell proliferation, invasion, and metastasis, causing S-phase arrest.
Conclusions:
- CCNA2 is significantly associated with prostate cancer prognosis.
- CCNA2 may serve as a prognostic biomarker for prostate cancer.
- CCNA2 represents a potential novel therapeutic target for prostate cancer treatment.
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