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Molecular basis for receptor tyrosine kinase A-loop tyrosine transphosphorylation
Lingfeng Chen1,2,3, William M Marsiglia4, Huaibin Chen2
1School of Chemical Engineering, Nanjing University of Science and Technology, Nanjing, China.
Abstract:
A long-standing mystery shrouds the mechanism by which catalytically repressed receptor tyrosine kinase domains accomplish transphosphorylation of activation loop (A-loop) tyrosines. Here we show that this reaction proceeds via an asymmetric complex that is thermodynamically disadvantaged because of an electrostatic repulsion between enzyme and substrate kinases. Under physiological conditions, the energetic gain resulting from ligand-induced dimerization of extracellular domains overcomes this opposing clash, stabilizing the A-loop-transphosphorylating dimer. A unique pathogenic fibroblast growth factor receptor gain-of-function mutation promotes formation of the complex responsible for phosphorylation of A-loop tyrosines by eliminating this repulsive force. We show that asymmetric complex formation induces a more phosphorylatable A-loop conformation in the substrate kinase, which in turn promotes the active state of the enzyme kinase. This explains how quantitative differences in the stability of ligand-induced extracellular dimerization promotes formation of the intracellular A-loop-transphosphorylating asymmetric complex to varying extents, thereby modulating intracellular kinase activity and signaling intensity.
Insights
Receptor tyrosine kinase transphosphorylation occurs via an unstable asymmetric complex. Ligand binding stabilizes this complex, enabling kinase activation and signaling, with mutations impacting stability and activity.
Area of Science:
- Molecular Biology
- Biochemistry
- Cell Signaling
Background:
- Receptor tyrosine kinases (RTKs) regulate crucial cellular processes.
- The mechanism of transphosphorylation, particularly of activation loop (A-loop) tyrosines in catalytically repressed RTKs, remains poorly understood.
- Understanding RTK activation is vital for deciphering signaling pathways and disease mechanisms.
Purpose of the Study:
- To elucidate the mechanism of A-loop tyrosine transphosphorylation in RTKs.
- To investigate the role of complex formation and electrostatic interactions in RTK activation.
- To understand how mutations affect RTK activity and signaling.
Main Methods:
- Biochemical assays to study kinase complex formation and activity.
- Analysis of electrostatic interactions between enzyme and substrate kinases.
- Investigating the impact of a pathogenic fibroblast growth factor receptor (FGFR) mutation on complex stability and phosphorylation.
Main Results:
- RTK transphosphorylation proceeds through a thermodynamically disadvantaged asymmetric complex due to electrostatic repulsion.
- Ligand-induced dimerization of extracellular domains stabilizes the transphosphorylating dimer under physiological conditions.
- A pathogenic FGFR mutation enhances complex formation by eliminating repulsive forces, leading to increased A-loop phosphorylation and kinase activity.
Conclusions:
- Asymmetric complex formation is crucial for A-loop tyrosine phosphorylation and RTK activation.
- The stability of extracellular dimerization dictates the extent of intracellular asymmetric complex formation and kinase activity.
- This mechanism explains how RTK signaling intensity is modulated and how specific mutations can lead to aberrant signaling.
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