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Low-frequency TP53 hotspot mutation contributes to chemoresistance through clonal expansion in acute myeloid leukemia
Bowen Yan1, Qinwei Chen1,2, Jianfeng Xu3,4
1Department of Anatomy and Cell Biology, College of Medicine, University of Florida, Gainesville, FL, USA.
Abstract:
TP53 mutations (TP53mut) in AML patients associate with poor prognosis that may affect therapy and outcome. In addition to TP53 mut patients, TCGA AML patient sequencing data show that there are around 3% of patients have detectable low-frequency TP53mut reads. Importantly, these patients showed worse outcome as compared with the TP53 wild type (TP53wt) patients. We have studied the effect of low-frequency TP53mut in two AML cell lines, OCI-AML2 and MV4-11. Both cells have low-frequency single hotspot TP53mut. Interestingly, the resistant cells derived from both lines have homogeneous TP53mut. TP53mut clones isolated from the parental cells also show increased chemoresistance potential and have higher population of leukemia stem cell (LSC) maker positive cells, a characteristic of chemoresistant cells. When mixed with TP53wt cells, the TP53mut cells show survival advantage suggesting its potential to develop chemoresistance. We previously showed that histone deacetylase inhibitor Romidepsin can re-sensitize chemoresistant cells by eradicating LSC marker positive cells. Here we further show that Romidepsin can reactivate p53 targeted genes which are dysregulated in TP53mut cells and preferentially targets TP53mut subpopulation. Therefore, our study shows that low-frequency TP53mut is linked to chemoresistance and sheds light on therapeutic strategies for treatments on chemoresistance.
Insights
Low-frequency TP53 mutations in acute myeloid leukemia (AML) are linked to chemoresistance and poor outcomes. The drug Romidepsin shows promise in re-sensitizing resistant cells by targeting these TP53-mutated cells.
Area of Science:
- Hematology
- Cancer Biology
- Genetics
Background:
- TP53 mutations (TP53mut) in acute myeloid leukemia (AML) patients are associated with poor prognosis.
- A subset of AML patients (around 3%) exhibit low-frequency TP53mut reads, correlating with worse outcomes compared to TP53 wild-type (TP53wt) patients.
Purpose of the Study:
- To investigate the impact of low-frequency TP53 mutations on chemoresistance in AML.
- To explore the therapeutic potential of Romidepsin in overcoming chemoresistance driven by TP53 mutations.
Main Methods:
- Studied the effect of low-frequency TP53mut in two AML cell lines (OCI-AML2 and MV4-11).
- Isolated and analyzed TP53mut clones for chemoresistance and leukemia stem cell (LSC) marker expression.
- Assessed the survival advantage of TP53mut cells when co-cultured with TP53wt cells.
- Evaluated the efficacy of Romidepsin in re-sensitizing chemoresistant cells and reactivating p53-targeted genes.
Main Results:
- Homogeneous TP53mut was observed in chemoresistant cell lines derived from parental cells with low-frequency TP53mut.
- TP53mut clones exhibited increased chemoresistance and a higher proportion of LSC marker-positive cells.
- TP53mut cells demonstrated a survival advantage over TP53wt cells, indicating potential for chemoresistance development.
- Romidepsin re-sensitized chemoresistant cells, eradicated LSC marker-positive cells, reactivated p53-targeted genes, and preferentially targeted TP53mut subpopulations.
Conclusions:
- Low-frequency TP53 mutations are a significant factor contributing to chemoresistance in AML.
- Romidepsin is a potential therapeutic strategy for treating chemoresistant AML, particularly in patients with TP53 mutations.
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