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Molecular and functional characterization of the SBP-box transcription factor SPL-CNR in tomato fruit ripening and
Tongfei Lai1, Xiaohong Wang1, Bishun Ye1
1Research Centre for Plant RNA Signaling and Zhejiang Provincial Key Laboratory for Genetic Improvement and Quality Control of Medicinal Plants, College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China.
Abstract:
SlSPL-CNR, an SBP-box transcription factor (TF) gene residing at the epimutant Colourless non-ripening (Cnr) locus, is involved in tomato ripening. This epimutant provides a unique model to investigate the (epi)genetic basis of fruit ripening. Here we report that SlSPL-CNR is a nucleus-localized protein with a distinct monopartite nuclear localization signal (NLS). It consists of four consecutive residues ' 30KRKR33' at the N-terminus of the protein. Mutation of the NLS abolishes SlSPL-CNR's ability to localize in the nucleus. SlSPL-CNR comprises two zinc-finger motifs (ZFMs) within the C-terminal SBP-box domain. Both ZFMs contribute to zinc-binding activity. SlSPL-CNR can induce cell death in tomato and tobacco, dependent on its nuclear localization. However, the two ZFMs have differential impacts on SlSPL-CNR's induction of severe necrosis or mild necrotic ringspot. NLS and ZFM mutants cannot complement Cnr fruits to ripen. SlSPL-CNR interacts with SlSnRK1. Virus-induced SlSnRK1 silencing leads to reduction in expression of ripening-related genes and inhibits ripening in tomato. We conclude that SlSPL-CNR is a multifunctional protein that consists of a distinct monopartite NLS, binds to zinc, and interacts with SlSnRK1 to affect cell death and tomato fruit ripening.
Insights
SlSPL-CNR, a transcription factor gene, is crucial for tomato fruit ripening. Its nuclear localization and zinc-binding activity, along with interaction with SlSnRK1, regulate cell death and ripening processes.
Area of Science:
- Plant Molecular Biology
- Epigenetics
- Fruit Ripening Physiology
Background:
- The epimutant Colourless non-ripening (Cnr) locus in tomato provides a model for studying fruit ripening genetics.
- SlSPL-CNR, an SBP-box transcription factor (TF) gene at the Cnr locus, is implicated in tomato ripening.
Purpose of the Study:
- To characterize the SlSPL-CNR protein, including its localization, functional domains, and interactions.
- To elucidate the role of SlSPL-CNR in tomato fruit ripening and cell death.
Main Methods:
- Nuclear localization signal (NLS) and zinc-finger motif (ZFM) mutation analysis.
- Cell death induction assays in tomato and tobacco.
- Interaction studies with SlSnRK1.
- Virus-induced gene silencing of SlSnRK1.
Main Results:
- SlSPL-CNR is a nucleus-localized protein with a monopartite NLS (30KRKR33) essential for nuclear entry.
- Both ZFMs in the SBP-box domain contribute to zinc-binding, with differential effects on necrosis.
- NLS and ZFM mutants failed to complement Cnr fruits for ripening.
- SlSPL-CNR interacts with SlSnRK1, and SlSnRK1 silencing inhibits ripening-related gene expression and tomato ripening.
Conclusions:
- SlSPL-CNR is a multifunctional protein regulating tomato fruit ripening and cell death.
- Its nuclear localization, zinc-binding capacity, and interaction with SlSnRK1 are critical for its function.
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