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Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
ADAM12 is A Potential Therapeutic Target Regulated by Hypomethylation in Triple-Negative Breast Cancer
Saioa Mendaza1, Ane Ulazia-Garmendia1, Iñaki Monreal-Santesteban1
1Molecular Pathology of Cancer Group, Navarrabiomed, ComplejoHospitalario de Navarra (CHN), Universidad Pública de Navarra (UPNA), Instituto de Investigación Sanitaria de Navarra (IdiSNA), Irunlarrea 3, 31008 Pamplona, Spain.
Abstract:
Triple-negative breast cancer (TNBC) is the most aggressive breast cancer subtype and currently lacks any effective targeted therapy. Since epigenetic alterations are a common event in TNBC, DNA methylation profiling can be useful for identifying potential biomarkers and therapeutic targets. Here, genome-wide DNA methylation from eight TNBC and six non-neoplastic tissues was analysed using Illumina Human Methylation 450K BeadChip. Results were validated by pyrosequencing in an independent cohort of 50 TNBC and 24 non-neoplastic samples, where protein expression was also assessed by immunohistochemistry. The functional role of disintegrin and metalloproteinase domain-containing protein 12(ADAM12) in TNBC cell proliferation, migration and drug response was analysed by gene expression silencing with short hairpin RNA. Three genes (Von Willenbrand factor C and Epidermal Growth Factor domain-containing protein (VWCE), tetraspanin-9 (TSPAN9) and ADAM12) were found to be exclusively hypomethylated in TNBC. Furthermore, ADAM12 hypomethylation was associated with a worse outcome in TNBC tissues and was also found in adjacent-to-tumour tissue and, preliminarily, in plasma from TNBC patients. In addition, ADAM12 silencing decreased TNBC cell proliferation and migration and improved doxorubicin sensitivity in TNBC cells. Our results indicate that ADAM12 is a potential therapeutic target and its hypomethylation could be a poor outcome biomarker in TNBC.
Insights
Triple-negative breast cancer (TNBC) shows exclusive hypomethylation in three genes, including ADAM12. ADAM12 hypomethylation predicts worse outcomes and suggests it as a therapeutic target for TNBC.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Triple-negative breast cancer (TNBC) is an aggressive subtype lacking targeted therapies.
- Epigenetic alterations, particularly DNA methylation, are prevalent in TNBC.
- Identifying novel biomarkers and therapeutic targets is crucial for TNBC management.
Purpose of the Study:
- To identify potential DNA methylation biomarkers and therapeutic targets in TNBC.
- To investigate the role of specific hypomethylated genes in TNBC progression and treatment response.
- To evaluate ADAM12 as both a prognostic biomarker and a therapeutic target.
Main Methods:
- Genome-wide DNA methylation analysis using Illumina Human Methylation 450K BeadChip on TNBC and non-neoplastic tissues.
- Validation of methylation status by pyrosequencing in an independent cohort.
- Assessment of protein expression via immunohistochemistry.
- Functional analysis of ADAM12 using gene silencing (shRNA) in TNBC cell lines.
Main Results:
- Three genes (VWCE, TSPAN9, ADAM12) were exclusively hypomethylated in TNBC.
- ADAM12 hypomethylation correlated with worse prognosis in TNBC and was detected in adjacent tissues and plasma.
- ADAM12 silencing reduced TNBC cell proliferation and migration and enhanced doxorubicin sensitivity.
Conclusions:
- ADAM12 hypomethylation serves as a potential poor outcome biomarker in TNBC.
- ADAM12 represents a promising therapeutic target for triple-negative breast cancer.
- Epigenetic profiling can uncover actionable targets in aggressive cancer subtypes.
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