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Published on: May 1, 2018
Biased Diversity for Effective Virtual Screening
Eric J Martin1, Johanna M Jansen1
1Novartis Institutes for BioMedical Research, 5300 Chiron Way, Emeryville, California 94608, United States.
Abstract:
Virtual screening is no longer merely a matter of identifying the subset of compounds from a large collection likely to be active against a particular endpoint. This viewpoint shares some distinctive practices at Novartis, where virtual screening combines multiple computational tools that marry the competing goals of biasing the selection of compounds toward multiple desired properties, while diversifying the selection to sample the available chemistry space, identifying quality compounds that inform drug discovery. Topics include the various considerations needed for a successful virtual screening practice: triaging, compound quality, accuracy and test sets, activity prediction including multitask modeling, virtual profiling, automation, multiproperty bias, diversity and property spaces, and biased-diversity designs.
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