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Updated: Dec 29, 2025

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Unraveling Entropic Rate Acceleration Induced by Solvent Dynamics in Membrane Enzymes
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Hydrogen Bond Dynamics in the Solvation Shell on Proton Transfer in Aqueous Solution
Yonghui Zeng1, Ailin Li2, Tianying Yan1
1Institute of New Energy Material Chemistry, School of Materials Science and Engineering, National Institute for Advanced Materials, Nankai University, Tianjin 300350, China.
The Journal of Physical Chemistry. B
|February 8, 2020
Summary
Molecular dynamics simulations reveal how water molecules rearrange during proton transfer. Breaking and forming hydrogen bonds in hydronium solvation shells are key to this essential process.
Area of Science:
- Physical Chemistry
- Computational Chemistry
- Solution Chemistry
Background:
- Proton transfer (PT) is fundamental in aqueous solutions.
- Understanding hydrogen bond (HB) dynamics is crucial for PT mechanisms.
- The structure of hydronium (H3O+) and its solvation shell influences PT.
Purpose of the Study:
- To investigate the detailed hydrogen bond (HB) dynamics during proton transfer (PT) in aqueous solution.
- To analyze the role of solvation shells in the proton transfer process.
- To elucidate the behavior of water molecules around hydronium (H3O+).
Main Methods:
- Utilizing molecular dynamics (MD) simulations.
- Employing the multistate empirical valence bond (MS-EVB) model.
- Analyzing hydrogen bond dynamics in solvation shells.
Main Results:
- Water molecules in the hydronium (H3O+) first solvation shell break accepted HBs to maintain a distorted Eigen (H9O4+) configuration.
- Cleavage and formation of accepted HBs are critical for driving PT.
- Proton transfer leads to inequivalent water-donated and -accepted HBs around H3O+.
Conclusions:
- The study provides insights into the molecular mechanisms of proton transfer in water.
- Hydrogen bond dynamics in solvation shells are essential for proton transfer events.
- The excess proton significantly influences the hydrogen bonding network around hydronium (H3O+).
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