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Updated: Dec 29, 2025

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Published on: May 30, 2025
Non-coding RNAs in GI cancers: from cancer hallmarks to clinical utility
Mihnea Paul Dragomir1, Scott Kopetz2, Jaffer A Ajani2
1Experimental Therapeutics, University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Abstract:
One of the most unexpected discoveries in molecular oncology, in the last decades, was the identification of a new layer of protein coding gene regulation by transcripts that do not codify for proteins, the non-coding RNAs. These represent a heterogeneous category of transcripts that interact with many types of genetic elements, including regulatory DNAs, coding and other non-coding transcripts and directly to proteins. The final outcome, in the malignant context, is the regulation of any of the cancer hallmarks. Non-coding RNAs represent the most abundant type of hormones that contribute significantly to cell-to cell communication, revealing a complex interplay between tumour cells, tumour microenvironment cells and immune cells. Consequently, profiling their abundance in bodily fluids became a mainstream of biomarker identification. Therapeutic targeting of non-coding RNAs represents a new option for clinicians that is currently under development. This review will present the biology and translational value of three of the most studied categories on non-coding RNAs, the microRNAs, the long non-coding RNAs and the circular RNAs. We will also focus on some aspirational concepts that can help in the development of clinical applications related to non-coding RNAs, including using pyknons to discover new non-coding RNAs, targeting human-specific transcripts which are expressed specifically in the tumour cell and using non-coding RNAs to increase the efficiency of immunotherapy.
Insights
Non-coding RNAs regulate gene expression and cancer hallmarks. This review explores microRNAs, long non-coding RNAs, and circular RNAs for cancer biomarkers and therapies.
Area of Science:
- Molecular Oncology
- Gene Regulation
- Biomarker Discovery
Background:
- Non-coding RNAs (ncRNAs) are key regulators of protein-coding genes.
- ncRNAs interact with DNA, RNA, and proteins, influencing cancer hallmarks.
- They are crucial in cell-to-cell communication within the tumor microenvironment.
Purpose of the Study:
- To review the biology and translational value of microRNAs, long non-coding RNAs, and circular RNAs.
- To discuss novel concepts for clinical applications of ncRNAs in cancer.
- To highlight the potential of ncRNAs in cancer biomarker identification and immunotherapy.
Main Methods:
- Literature review focusing on ncRNA biology and clinical applications.
- Analysis of ncRNA roles in cancer hallmarks and cell communication.
- Exploration of emerging strategies like pyknon discovery and targeting tumor-specific transcripts.
Main Results:
- ncRNAs significantly regulate gene expression and cancer progression.
- ncRNA profiling in bodily fluids is a mainstream approach for biomarker identification.
- Therapeutic targeting of ncRNAs is an emerging clinical strategy.
Conclusions:
- MicroRNAs, long non-coding RNAs, and circular RNAs have significant translational value in oncology.
- Novel concepts like pyknons and tumor-specific targeting offer new avenues for ncRNA-based therapies.
- ncRNAs hold promise for enhancing immunotherapy efficacy and developing new cancer biomarkers.
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