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Dyadobacter bucti sp. nov., isolated from subsurface sediment.
Xian-Lin He1, De Zhou1, Huiqun Gao2
1College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China.
International Journal of Systematic and Evolutionary Microbiology
|February 11, 2020
Summary
A novel bacterium, Dyadobacter bucti, was discovered in Qinghai-Tibetan Plateau sediments. This yellow-pigmented rod expands the known diversity within the Dyadobacter genus.
Area of Science:
- Microbiology
- Bacteriology
- Environmental Science
Background:
- The Qinghai-Tibetan Plateau harbors unique microbial ecosystems.
- Characterizing novel bacteria is crucial for understanding biodiversity and ecological roles.
Purpose of the Study:
- To isolate and characterize a novel bacterial species from a subsurface sediment sample.
- To determine the phylogenetic and genotypic relationship of the isolate to known bacteria.
Main Methods:
- Isolation and cultivation of bacteria from sediment samples.
- Gram staining, biochemical tests, and physiological characterization.
- 16S rRNA gene sequencing and whole-genome analysis.
- Phylogenetic analysis and determination of average nucleotide identity (ANI).
Main Results:
- A novel Gram-negative, yellow-pigmented, aerobic bacterium, strain QTA69T, was isolated.
- Phylogenetic analysis placed strain QTA69T within the genus Dyadobacter, closely related to D. sediminis, D. ginsengisoli, and D. psychrophilus.
- Physiological tests revealed optimal growth at 25-28°C, pH 7.0-8.0, and 0-1.0% NaCl.
- Genome sequencing showed a genome size of 8.41 Mbp with a G+C content of 46.87%.
Conclusions:
- Strain QTA69T represents a novel species, proposed as Dyadobacter bucti sp. nov.
- The study expands the known diversity of the Dyadobacter genus.
- Dyadobacter bucti is adapted to the specific environmental conditions of the Qinghai-Tibetan Plateau.
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