V-ATPase a3 isoform mutations identified in osteopetrosis patients abolish its expression and disrupt osteoclast function
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Updated: Dec 28, 2025

Skeletal Phenotype Analysis of a Conditional Stat3 Deletion Mouse Model
Published on: July 3, 2020
Naomi Matsumoto1, Reina Matsukawa1, Shohei Takahashi1
1Division of Biochemistry, School of Pharmacy, Iwate Medical University, Yahaba, Iwate, 028-3694, Japan.
Abstract:
The a3 isoform of vacuolar-type proton-pumping ATPase (V-ATPase) is essential for bone resorption by osteoclasts. Although more than 90 mutations of the human a3 gene have been identified in patients with infantile malignant osteopetrosis, it is unclear whether they lead to osteoclast dysfunction. We have established an in vitro assay to induce osteoclasts from spleen macrophages derived from a3-knockout mice. Here, we examined the effects of these mutations in a3-knockout osteoclasts. We were interested in four mutations, two short deletions and two missense mutations, previously identified in the a3 cytosolic domain. a3 harboring either of the two short deletions was hardly expressed in osteoclasts and calcium phosphate resorption was impaired. On the other hand, osteoclasts expressing a3 with either of the two missense mutations exhibited no defects. Specifically, expression levels of the mutant proteins, V-ATPase assembly, and calcium phosphate resorption activity were similar to those of the wild type. Moreover, these missense mutants interacted with Rab7, a small GTPase that regulates lysosomal trafficking. These results suggest that the short deletions impair a3 expression and thus disrupt V-ATPase subunit assembly essential for bone resorption, while the missense mutations do not cause osteoclast dysfunction without an additional mutation(s) or impair resorption of bone, but not of calcium phosphate.
Insights
Short deletions in the vacuolar-type proton-pumping ATPase (V-ATPase) a3 subunit disrupt osteoclast function and bone resorption. However, specific missense mutations in the a3 cytosolic domain do not impair osteoclast activity.
Area of Science:
- Biochemistry
- Cell Biology
- Genetics
Background:
- The a3 isoform of vacuolar-type proton-pumping ATPase (V-ATPase) is crucial for osteoclast-mediated bone resorption.
- Over 90 mutations in the human a3 gene are linked to infantile malignant osteopetrosis, but their functional impact on osteoclasts remains unclear.
Purpose of the Study:
- To investigate the functional consequences of specific a3 gene mutations on osteoclast activity and V-ATPase function.
- To determine if identified mutations in the a3 cytosolic domain lead to osteoclast dysfunction.
Main Methods:
- Established an in vitro assay to generate osteoclasts from a3-knockout mouse spleen macrophages.
- Examined the expression, V-ATPase assembly, and calcium phosphate resorption activity of osteoclasts expressing mutant a3 proteins (two short deletions, two missense mutations).
- Assessed the interaction of mutant a3 proteins with Rab7.
Main Results:
- Osteoclasts expressing a3 with short deletions showed impaired expression and calcium phosphate resorption.
- Osteoclasts expressing a3 with missense mutations exhibited normal expression levels, V-ATPase assembly, and calcium phosphate resorption activity.
- Missense mutants successfully interacted with Rab7, indicating preserved lysosomal trafficking pathways.
Conclusions:
- Short deletions in the a3 subunit disrupt V-ATPase assembly and impair osteoclast bone resorption.
- Missense mutations in the a3 cytosolic domain, as studied, do not appear to cause osteoclast dysfunction or significantly impair bone resorption.
- Further investigation may be needed to understand the role of these missense mutations in the context of additional genetic factors or specific bone resorption processes.
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