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Updated: Dec 28, 2025

Author Spotlight: Investigating Liver Cancer Pathogenesis Using Patient-Derived Organoids
Published on: August 18, 2023
Identification of Potentially Therapeutic Target Genes of Hepatocellular Carcinoma
Chengzhang Li1, Jiucheng Xu1,2
1College of Life Science, Henan Normal University, Xinxiang 453007, China.
Background:
Hepatocellular carcinoma (HCC) is a major threat to public health. However, few effective therapeutic strategies exist. We aimed to identify potentially therapeutic target genes of HCC by analyzing three gene expression profiles.
Methods:
The gene expression profiles were analyzed with GEO2R, an interactive web tool for gene differential expression analysis, to identify common differentially expressed genes (DEGs). Functional enrichment analyses were then conducted followed by a protein-protein interaction (PPI) network construction with the common DEGs. The PPI network was employed to identify hub genes, and the expression level of the hub genes was validated via data mining the Oncomine database. Survival analysis was carried out to assess the prognosis of hub genes in HCC patients.
Results:
A total of 51 common up-regulated DEGs and 201 down-regulated DEGs were obtained after gene differential expression analysis of the profiles. Functional enrichment analyses indicated that these common DEGs are linked to a series of cancer events. We finally identified 10 hub genes, six of which (OIP5, ASPM, NUSAP1, UBE2C, CCNA2, and KIF20A) are reported as novel HCC hub genes. Data mining the Oncomine database validated that the hub genes have a significant high level of expression in HCC samples compared normal samples (t-test, p < 0.05). Survival analysis indicated that overexpression of the hub genes is associated with a significant reduction (p < 0.05) in survival time in HCC patients.
Conclusions:
We identified six novel HCC hub genes that might be therapeutic targets for the development of drugs for some HCC patients.
Insights
Researchers identified six novel hepatocellular carcinoma (HCC) hub genes. These genes show high expression in HCC and are linked to reduced patient survival, suggesting potential therapeutic targets.
Area of Science:
- Oncology
- Genetics
- Bioinformatics
Background:
- Hepatocellular carcinoma (HCC) poses a significant global health challenge.
- Effective therapeutic strategies for HCC remain limited.
- Identifying novel therapeutic targets is crucial for improving HCC patient outcomes.
Purpose of the Study:
- To identify potential therapeutic target genes for HCC.
- To analyze gene expression profiles to find differentially expressed genes (DEGs) in HCC.
- To validate the role of identified hub genes in HCC prognosis.
Main Methods:
- Utilized GEO2R for differential gene expression analysis of HCC datasets.
- Performed functional enrichment analysis and constructed protein-protein interaction (PPI) networks.
- Validated hub gene expression using the Oncomine database and assessed survival outcomes.
Main Results:
- Identified 51 up-regulated and 201 down-regulated common DEGs.
- Discovered 10 hub genes, including six novel HCC-associated genes (OIP5, ASPM, NUSAP1, UBE2C, CCNA2, KIF20A).
- Confirmed significantly higher expression of these hub genes in HCC tissues and their association with reduced patient survival.
Conclusions:
- Identified six novel hub genes as potential therapeutic targets for HCC.
- These genes represent promising candidates for future drug development in HCC treatment.
- The findings contribute to a better understanding of HCC molecular mechanisms and therapeutic strategies.
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