Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Mechanistic Models: Compartment Models in Individual and Population Analysis01:23

Mechanistic Models: Compartment Models in Individual and Population Analysis

205
Mechanistic models are utilized in individual analysis using single-source data, but imperfections arise due to data collection errors, preventing perfect prediction of observed data. The mathematical equation involves known values (Xi), observed concentrations (Ci), measurement errors (εi), model parameters (ϕj), and the related function (ƒi) for i number of values. Different least-squares metrics quantify differences between predicted and observed values. The ordinary least...
205
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving01:29

Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving

235
Mechanistic models play a crucial role in algorithms for numerical problem-solving, particularly in nonlinear mixed effects modeling (NMEM). These models aim to minimize specific objective functions by evaluating various parameter estimates, leading to the development of systematic algorithms. In some cases, linearization techniques approximate the model using linear equations.
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
235
One-Compartment Open Model: Wagner-Nelson and Loo Riegelman Method for ka Estimation01:24

One-Compartment Open Model: Wagner-Nelson and Loo Riegelman Method for ka Estimation

1.0K
This lesson introduces two critical methods in pharmacokinetics, the Wagner-Nelson and Loo-Riegelman methods, used for estimating the absorption rate constant (ka) for drugs administered via non-intravenous routes. The Wagner-Nelson method relates ka to the plasma concentration derived from the slope of a semilog percent unabsorbed time plot. However, it is limited to drugs with one-compartment kinetics and can be impacted by factors like gastrointestinal motility or enzymatic degradation.
On...
1.0K
Model Approaches for Pharmacokinetic Data: Distributed Parameter Models01:06

Model Approaches for Pharmacokinetic Data: Distributed Parameter Models

205
Pharmacokinetic models are mathematical constructs that represent and predict the time course of drug concentrations in the body, providing meaningful pharmacokinetic parameters. These models are categorized into compartment, physiological, and distributed parameter models.
The distributed parameter models are specifically designed to account for variations and differences in some drug classes. This model is particularly useful for assessing regional concentrations of anticancer or...
205
Randomized Experiments01:13

Randomized Experiments

8.8K
The randomization process involves assigning study participants randomly to experimental or control groups based on their probability of being equally assigned. Randomization is meant to eliminate selection bias and balance known and unknown confounding factors so that the control group is similar to the treatment group as much as possible. A computer program and a random number generator can be used to assign participants to groups in a way that minimizes bias.
Simple randomization
Simple...
8.8K
Multiple Regression01:25

Multiple Regression

3.7K
Multiple regression assesses a linear relationship between one response or dependent variable and two or more independent variables. It has many practical applications.
Farmers can use multiple regression to determine the crop yield based on more than one factor, such as water availability, fertilizer, soil properties, etc. Here, the crop yield is the response or dependent variable as it depends on the other independent variables. The analysis requires the construction of a scatter plot...
3.7K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Long-Term Storage of Formalin-Fixed Paraffin-Embedded Tissues Negatively Impacts Next-Generation Sequencing: Successful Restoration with a DNA Repair Enzyme.

Clinical chemistry·2026
Same author

Incorporating external risk information with the Cox model under population heterogeneity: applications to trans-ancestry polygenic hazard scores.

Journal of the Royal Statistical Society. Series A, (Statistics in Society)·2026
Same author

Multiomic characterization of malignant pulmonary nodules and development of a methylation-based diagnostic Model.

Journal of translational medicine·2026
Same author

Legacy and Emerging Per- and Polyfluoroalkyl Substances (PFAS) in Glacial Meltwater from Mt. Everest.

Environmental science & technology·2026
Same author

Metabolic control of smooth muscle cell phenotype switching in atherosclerosis.

bioRxiv : the preprint server for biology·2026
Same author

mFABIO: An integrative multi-tissue TWAS fine-mapping approach to prioritize potentially causal genes and tissues underlying binary traits.

PLoS genetics·2026
Same journal

A Bayesian method for analyzing combinations of continuous, ordinal, and nominal categorical data with missing values.

Journal of multivariate analysis·2026
Same journal

Hierarchical structure-guided high-dimensional multi-view clustering.

Journal of multivariate analysis·2026
Same journal

Quadratic inference with dense functional responses.

Journal of multivariate analysis·2025
Same journal

Graph-constrained Analysis for Multivariate Functional Data.

Journal of multivariate analysis·2025
Same journal

From multivariate to functional data analysis: fundamentals, recent developments, and emerging areas.

Journal of multivariate analysis·2024
Same journal

Modeling the Cholesky factors of covariance matrices of multivariate longitudinal data.

Journal of multivariate analysis·2024
See all related articles

Related Experiment Video

Updated: Dec 28, 2025

Development of an Individual-Tree Basal Area Increment Model using a Linear Mixed-Effects Approach
04:35

Development of an Individual-Tree Basal Area Increment Model using a Linear Mixed-Effects Approach

Published on: July 3, 2020

3.6K

Generalized Linear Mixed Models with Gaussian Mixture Random Effects: Inference and Application.

Lanfeng Pan1, Yehua Li2, Kevin He3

  • 1Amazon.com, Inc., Seattle, WA 98109, U.S.A.

Journal of Multivariate Analysis
|February 18, 2020
PubMed
Summary
This summary is machine-generated.

We introduce a new statistical model for clustered data using Gaussian mixture random effects. This approach enhances kidney transplant center evaluation by identifying non-standard performance and controlling false discoveries.

Keywords:
ClusteringFalse discovery rateLatent variablesLocally restricted likelihood ratio testPenalized EM algorithmPrimary 62H30Repeated measureSecondary 62H15

More Related Videos

The Innovation Arena: A Method for Comparing Innovative Problem-Solving Across Groups
14:14

The Innovation Arena: A Method for Comparing Innovative Problem-Solving Across Groups

Published on: May 13, 2022

6.2K
Applying an eMASS Customization Program as a Research Tool to Evaluate Consumer Benefits
08:27

Applying an eMASS Customization Program as a Research Tool to Evaluate Consumer Benefits

Published on: September 27, 2019

7.2K

Related Experiment Videos

Last Updated: Dec 28, 2025

Development of an Individual-Tree Basal Area Increment Model using a Linear Mixed-Effects Approach
04:35

Development of an Individual-Tree Basal Area Increment Model using a Linear Mixed-Effects Approach

Published on: July 3, 2020

3.6K
The Innovation Arena: A Method for Comparing Innovative Problem-Solving Across Groups
14:14

The Innovation Arena: A Method for Comparing Innovative Problem-Solving Across Groups

Published on: May 13, 2022

6.2K
Applying an eMASS Customization Program as a Research Tool to Evaluate Consumer Benefits
08:27

Applying an eMASS Customization Program as a Research Tool to Evaluate Consumer Benefits

Published on: September 27, 2019

7.2K

Area of Science:

  • Biostatistics
  • Health Services Research
  • Medical Informatics

Background:

  • Clustered data, such as patient outcomes within healthcare facilities, presents unique statistical challenges.
  • Evaluating healthcare provider performance, like kidney transplant centers, requires accounting for patient-level factors and facility-level variations.
  • Existing models may struggle with identifiability and accurately assessing heterogeneity among providers.

Purpose of the Study:

  • To propose a novel class of generalized linear mixed models incorporating Gaussian mixture random effects for clustered data.
  • To address weak identifiability issues inherent in mixture models.
  • To develop methods for determining the optimal number of mixture components and controlling false discovery rates in provider screening.

Main Methods:

  • A penalized Expectation Maximization (EM) algorithm is employed for model fitting.
  • Sequential locally restricted likelihood ratio tests are developed to ascertain the number of Gaussian mixture components.
  • The model integrates patient-level risk factors and models transplant center effects using a finite Gaussian mixture.

Main Results:

  • The proposed model effectively handles clustered data and Gaussian mixture random effects.
  • The penalized EM algorithm overcomes identifiability challenges.
  • Likelihood ratio tests provide a robust method for selecting the number of mixture components.

Conclusions:

  • The developed statistical framework offers a powerful tool for analyzing heterogeneity in clustered data, exemplified by kidney transplant center performance.
  • The model facilitates accurate evaluation of transplant center quality by considering patient risk factors and center-specific effects.
  • This approach enables reliable screening of transplant centers for non-standard performance while controlling the false discovery rate.