The long noncoding RNA LINC00341 suppresses colorectal carcinoma by preventing cell migration and apoptosis

Shuyuan Li1, Shuo Chen1, Boxue Wang1

  • 1Department of Colorectal Surgery, Tianjin Union Medical Center, Tianjin, China.

Insights

Long noncoding RNA 341 (LINC00341) is downregulated in colorectal cancer, hindering apoptosis and promoting cell migration. Restoring LINC00341 levels may offer a new therapeutic strategy for this malignancy.

Area of Science:

  • Molecular Biology
  • Genetics
  • Oncology

Background:

  • Long noncoding RNAs (lncRNAs) regulate gene expression and are implicated in oncogenesis.
  • The functions of most lncRNAs, including their roles in colorectal carcinoma (CRC), remain largely unexplored.
  • Aberrant lncRNA expression is a known driver of tumor development.

Purpose of the Study:

  • To investigate the role of the novel lncRNA LINC00341 in colorectal carcinoma.
  • To elucidate the molecular mechanisms by which LINC00341 influences CRC progression.
  • To identify potential therapeutic targets for CRC based on lncRNA function.

Main Methods:

  • Microarray-based screening of CRC specimens to identify differentially expressed lncRNAs.
  • Functional assays including overexpression and silencing of LINC00341 in CRC cells.
  • RNA-pulldown assays to identify binding partners of LINC00341.
  • Analysis of HMGB2 localization and its impact on epithelial-mesenchymal transition (EMT).

Main Results:

  • LINC00341 was found to be aberrantly downregulated in metastatic CRC.
  • LINC00341 overexpression suppressed tumor growth and promoted apoptosis, while silencing accelerated proliferation and migration.
  • LINC00341 physically binds to HMGB2, stabilizing its cytoplasmic localization.
  • LINC00341 knockdown caused HMGB2 nuclear translocation, triggering EMT.

Conclusions:

  • LINC00341 acts as a tumor suppressor in colorectal carcinoma by inhibiting migration and promoting apoptosis.
  • The LINC00341-HMGB2 interaction is crucial for preventing EMT and maintaining tumor suppression.
  • This study reveals a novel lncRNA-mediated regulatory network with potential therapeutic implications for CRC.

Related Concept Videos

lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
9.6K
lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

3.3K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
3.6K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
23.8K
Experimental RNAi02:15

Experimental RNAi

RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
7.2K
Non-LTR Retrotransposons03:18

Non-LTR Retrotransposons

As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
13.0K