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Si2C5H2 isomers - search algorithms versus chemical intuition
Krishnan Thirumoorthy1, Andrew L Cooksy, Venkatesan S Thimmakondu
1Department of Chemistry, School of Advanced Sciences, Vellore Institute of Technology, Vellore - 632 014, Tamil Nadu, India.
Computational chemistry search algorithms missed several silicon-carbon isomers. Chemical intuition identified more structures, highlighting the need for both approaches in discovering new molecular geometries.
Area of Science:
- Computational Chemistry
- Theoretical Chemistry
- Materials Science
Background:
- Identifying novel molecular geometries is crucial for advancing chemical and materials science.
- Automated search algorithms are increasingly used, but their completeness is often questioned.
- The silicon-carbon compound Si2C5H2 serves as a test case for evaluating search strategies.
Purpose of the Study:
- To compare the efficacy of automated search algorithms versus human chemical intuition in identifying new molecular isomers.
- To evaluate the limitations of current search algorithms in exploring the potential energy surface for Si2C5H2.
- To provide theoretical data that may guide future experimental synthesis and characterization of Si2C5H2 isomers.
Main Methods:
- Utilized computational chemistry methods, including DFT (PBE0/def2-TZVP, B3LYP/6-311++G(2d,2p)) and coupled-cluster theory (CCSD(T)/def2-TZVP, CCSD(T)/cc-pVTZ).
- Employed 'coalescence kick' and 'cuckoo' search algorithms to identify low-energy isomers.
- Applied chemical intuition to propose alternative isomers within a defined energy range (30 kcal mol-1).
Main Results:
- Search algorithms predicted only four Si2C5H2 isomers within 30 kcal mol-1.
- Chemical intuition identified fourteen isomers within the same energy threshold.
- High-level calculations confirmed that at least seven isomers predicted by intuition were missed by the algorithms.
- All eighteen isomers, including the most stable one with a planar tetracoordinate carbon, remain experimentally undiscovered.
Conclusions:
- Automated search algorithms alone are insufficient for comprehensive isomer discovery.
- Chemical intuition remains a valuable tool, complementing algorithmic approaches in theoretical chemistry.
- The predicted structural and spectroscopic data may facilitate future experimental validation of these novel Si2C5H2 isomers.
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