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Updated: Dec 27, 2025

Single-Step Enrichment of a TAP-Tagged Histone Deacetylase of the Filamentous Fungus Aspergillus nidulans for Enzymatic Activity Assay
Published on: May 1, 2019
RcLS2F - A Novel Fungal Class 1 KDAC Co-repressor Complex in Aspergillus nidulans
Ingo Bauer1, Silke Gross1, Petra Merschak1
1Institute of Molecular Biology, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.
Abstract:
The fungal class 1 lysine deacetylase (KDAC) RpdA is a promising target for prevention and treatment of invasive fungal infection. RpdA is essential for survival of the most common air-borne mold pathogen Aspergillus fumigatus and the model organism Aspergillus nidulans. In A. nidulans, RpdA depletion induced production of previously unknown small bioactive substances. As known from yeasts and mammals, class 1 KDACs act as components of multimeric protein complexes, which previously was indicated also for A. nidulans. Composition of these complexes, however, remained obscure. In this study, we used tandem affinity purification to characterize different RpdA complexes and their composition in A. nidulans. In addition to known class 1 KDAC interactors, we identified a novel RpdA complex, which was termed RcLS2F. It contains ScrC, previously described as suppressor of the transcription factor CrzA, as well as the uncharacterized protein FscA. We show that recruitment of FscA depends on ScrC and we provide clear evidence that ΔcrzA suppression by ScrC depletion is due to a lack of transcriptional repression caused by loss of the novel RcLS2F complex. Moreover, RcLS2F is essential for sexual development and engaged in an autoregulatory feed-back loop.
Insights
Researchers identified a new protein complex, RcLS2F, involving fungal lysine deacetylase RpdA. This complex is crucial for fungal survival, sexual development, and regulating gene expression in Aspergillus nidulans.
Area of Science:
- Molecular Biology
- Mycology
- Biochemistry
Background:
- Class 1 lysine deacetylases (KDACs), like RpdA in *Aspergillus nidulans*, are essential for fungal survival and form multimeric complexes.
- The composition of these RpdA-containing complexes in fungi remained largely unknown.
- RpdA is a potential therapeutic target for invasive fungal infections caused by pathogens like *Aspergillus fumigatus*.
Purpose of the Study:
- To characterize the composition of RpdA-containing protein complexes in *Aspergillus nidulans*.
- To identify novel interactors and functional roles of RpdA complexes.
Main Methods:
- Tandem affinity purification was employed to isolate and identify RpdA-associated proteins.
- Co-immunoprecipitation and genetic analyses were used to confirm protein interactions and functional dependencies.
Main Results:
- A novel RpdA-containing complex, termed RcLS2F, was identified.
- RcLS2F comprises ScrC and the uncharacterized protein FscA, with FscA recruitment dependent on ScrC.
- Loss of the RcLS2F complex explains the suppression of *crzA* deletion phenotypes by ScrC depletion, indicating a role in transcriptional repression.
- RcLS2F is essential for fungal sexual development and participates in an autoregulatory feedback loop.
Conclusions:
- The novel RcLS2F complex plays a critical role in regulating gene expression and is essential for sexual development in *Aspergillus nidulans*.
- Understanding RpdA complex composition provides insights into fungal biology and potential antifungal strategies.
- The findings elucidate a mechanism for transcriptional repression involving RcLS2F and its interaction with the transcription factor CrzA.
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