Related Experiment Video

Updated: Dec 26, 2025

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
09:34

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Published on: April 4, 2018

34.5K

A New Single Nucleotide Polymorphism Database for North American Atlantic Salmon Generated Through Whole Genome

Guangtu Gao1, Michael R Pietrak2, Gary S Burr2

  • 1National Center for Cool and Cold Water Aquaculture, ARS-USDA, Kearneysville, WV, United States.

Frontiers in Genetics
|March 11, 2020
PubMed
Abstract

No abstract available in PubMed .

Keywords:
Atlantic salmonNorth AmericanSNP discoveryaquaculture stockscontinent of originwhole genome re-sequencing

More Related Videos

Infinium Assay for Large-scale SNP Genotyping Applications
13:33

Infinium Assay for Large-scale SNP Genotyping Applications

Published on: November 19, 2013

39.7K
A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene
07:00

A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene

Published on: April 1, 2019

10.3K

Related Experiment Videos

Last Updated: Dec 26, 2025

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
09:34

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Published on: April 4, 2018

34.5K
Infinium Assay for Large-scale SNP Genotyping Applications
13:33

Infinium Assay for Large-scale SNP Genotyping Applications

Published on: November 19, 2013

39.7K
A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene
07:00

A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene

Published on: April 1, 2019

10.3K

Related Concept Videos

Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

17.7K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
17.7K
Multi-species Conserved Sequences02:51

Multi-species Conserved Sequences

4.5K
Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale  studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
4.5K

Articles linked to this work by shared authors, journal, and citation graph.

De Novo Genome Assemblies of Four Rainbow Trout Genetic Lines Reveal Structural Variants in Pursuit of a Pangenome Reference.

Molecular ecology resources·2026

Evaluation of sample preparation methods for NMR-based metabolomics of Atlantic salmon (Salmo salar) ovarian fluid.

Fish physiology and biochemistry·2026

Development and application of an updated haplotype reference panel for association analysis of spontaneous sex reversal in XX rainbow trout.

Frontiers in genetics·2025

Genome-wide association analysis of resistance to bacterial cold-water disease in an important rainbow trout aquaculture breeding population.

Frontiers in genetics·2025

Extraction and Detection of Geosmin and 2-Methylisoborneol in Water and Fish using High-Capacity Sorptive Extraction Probes and GC-MS.

Journal of visualized experiments : JoVE·2025

Transcriptomic Profiles of Rainbow Trout (Oncorhynchus mykiss) Selectively Bred for High and Low Fillet Yield.

Marine biotechnology (New York, N.Y.)·2025

Preimplantation genetic testing and prenatal diagnosis of TANGO2 deficiency disorder with biallelic pathogenic variants using single-nucleotide polymorphism-based haplotyping and gap-polymerase chain reaction.

Frontiers in genetics·2026

Fabry nephropathy as the clinical anchor for kidney-centered metabolic surveillance: linking genetic heterogeneity to early risk identification.

Frontiers in genetics·2026

Clinical and genetic features of syndromic craniosynostosis in 18 Chinese probands: novel candidate genes and phenotypes of known pathogenic genes.

Frontiers in genetics·2026

NSF gene variants cause developmental and epileptic encephalopathy 96: expanding genotype and phenotypic spectrum with prenatal-onset features.

Frontiers in genetics·2026

Correction: Enhancing glaucoma prediction across ancestries: integrating functional annotation into multi-trait polygenic risk scores.

Frontiers in genetics·2026

Integrated genetic identification and molecular dynamics simulations in a novel LOXL3 genetic mutation associated with Stickler syndrome.

Frontiers in genetics·2026

A high-resolution nested PCR assay for genotyping Orientia tsutsugamushi based on a defined 700 bp segment of the TSA56 gene.

International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases·2026

A teaching case on mapping nematode mutations based on whole-genome sequencing.

Yi chuan = Hereditas·2026

The impact of sequencing depth and DP filtering on genotyping accuracy of SNP based on next-generation sequencing.

Yi chuan = Hereditas·2026

Defining and cataloging variants in pangenome graphs.

Cell genomics·2026

A genome-wide in vivo screen reveals fitness pathways required for streptococcal infective endocarditis.

PLoS pathogens·2026

[Recent Advances in the Classification and Treatment of Pediatric Gliomas].

No shinkei geka. Neurological surgery·2026
See all related articles
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies
Jove
Visualize
Contact Us