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Extended Lagrangian Born-Oppenheimer molecular dynamics using a Krylov subspace approximation.

Anders M N Niklasson1

  • 1Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA and Division of Scientific Computing, Department of Information Technology, Uppsala University, Box 337, SE-751 05 Uppsala, Sweden.

The Journal of Chemical Physics
|March 16, 2020
PubMed
Summary
This summary is machine-generated.

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This study introduces a low-rank approximation for integrating electronic equations of motion in extended Lagrangian Born-Oppenheimer molecular dynamics. This method enhances simulations for complex chemical systems without full inverse Jacobian calculations.

Area of Science:

  • Computational Chemistry
  • Materials Science
  • Quantum Mechanics

Background:

  • Extended Lagrangian Born-Oppenheimer molecular dynamics (M.D.) is crucial for simulating molecular systems.
  • Accurate integration of electronic equations of motion is computationally intensive.
  • Existing methods often require full inverse Jacobian kernel calculations or iterative optimizations.

Purpose of the Study:

  • To develop a computationally efficient method for integrating electronic equations of motion in extended Lagrangian Born-Oppenheimer M.D. simulations.
  • To enable the application of these simulations to a broader range of challenging chemical systems.
  • To reduce the computational cost associated with inverse Jacobian kernel calculations.

Main Methods:

  • Utilizing low-rank approximations of the inverse Jacobian kernel.

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  • Deriving kernel approximation from a pseudoinverse of a low-rank Jacobian estimate.
  • Employing Krylov subspace approximations for directional derivatives.
  • Main Results:

    • A tunable and adaptive kernel approximation is proposed.
    • The method allows for efficient preconditioning techniques.
    • Enables extended Lagrangian first-principles M.D. for reactive systems with sensitive charge solutions.

    Conclusions:

    • The proposed low-rank approximation offers a viable alternative to exact Jacobian calculations in M.D. simulations.
    • This approach extends the applicability of first-principles molecular dynamics to complex chemical problems.
    • It provides a formulation related to quasi-Newton and Newton-Krylov methods for nonlinear systems.