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Published on: May 27, 2021
Machine Learning Uncovers Food- and Excipient-Drug Interactions
Daniel Reker1, Yunhua Shi2, Ameya R Kirtane2
1David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Division of Gastroenterology, Hepatology and Endoscopy, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA; MIT-IBM Watson AI Lab, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Machine learning identified unknown biological effects of inactive ingredients. Vitamin A palmitate and abietic acid were found to inhibit P-glycoprotein (P-gp) and UGT2B7, impacting drug pharmacokinetics.
Area of Science:
- Pharmacology
- Drug Metabolism
- Computational Chemistry
Background:
- Inactive ingredients, considered safe, may possess unknown biological effects impacting drug efficacy.
- Proteins like P-glycoprotein (P-gp) and UGT2B7 are crucial for drug pharmacokinetics, affecting approximately 20% of FDA-approved drugs.
- Understanding these interactions is vital for drug safety and formulation development.
Purpose of the Study:
- To develop a machine learning platform for predicting unknown biological effects of inactive ingredients.
- To identify specific inactive ingredients that interact with P-glycoprotein (P-gp) and Uridine diphosphate-glucuronosyltransferase-2B7 (UGT2B7).
Main Methods:
- Application of state-of-the-art machine learning algorithms.
- In silico, in vitro, ex vivo, and in vivo validation studies.
- Focus on predicting interactions with P-glycoprotein (P-gp) and Uridine diphosphate-glucuronosyltransferase-2B7 (UGT2B7).
Main Results:
- Identification of vitamin A palmitate as a P-glycoprotein (P-gp) inhibitor.
- Identification of abietic acid as a Uridine diphosphate-glucuronosyltransferase-2B7 (UGT2B7) inhibitor.
- Experimental validations confirmed the predicted interactions.
Conclusions:
- The predictive framework successfully elucidates biological effects of commonly consumed inactive ingredients.
- Findings have significant implications for understanding food- and excipient-drug interactions.
- The platform supports the development of functional drug formulations.
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