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Updated: Dec 26, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Different Types of Atrial Fibrillation Share Patterns of Gut Microbiota Dysbiosis
Kun Zuo1, Xiandong Yin1, Kuibao Li1
1Heart Center & Beijing Key Laboratory of Hypertension, Beijing Chaoyang Hospital, Capital Medical University, Beijing, China.
Abstract:
Dysbiotic gut microbiota (GM) and disordered metabolic patterns are known to be involved in the clinical expression of atrial fibrillation (AF). However, little evidence has been reported in characterizing the specific changes in fecal microbiota in paroxysmal AF (PAF) and persistent AF (psAF). To provide a comprehensive understanding of GM dysbiosis in AF types, we assessed the GM signatures of 30 PAF patients, 20 psAF patients, and 50 non-AF controls based on metagenomic and metabolomic analyses. Compared with control subjects, similar changes of GM were identified in PAF and psAF patients, with elevated microbial diversity and similar alteration in the microbiota composition. PAF and psAF patients shared the majority of differential taxa compared with non-AF controls. Moreover, the similarity was also illuminated in microbial function and associated metabolic alterations. Additionally, minor disparity was observed in PAF compared with psAF. Several distinctive taxa between PAF and psAF were correlated with certain metabolites and atrial diameter, which might play a role in the pathogenesis of atrial remodeling. Our findings characterized the presence of many common features in GM shared by PAF and psAF, which occurred at the self-terminating PAF. Preventative and therapeutic measures targeting GM for early intervention to postpone the progression of AF are highly warranted.IMPORTANCE Atrial fibrillation has been identified to be associated with disordered gut microbiota. Notably, atrial fibrillation is a progressive disease and could be categorized as paroxysmal and persistent based on the duration of the episodes. The persistent atrial fibrillation patients are accompanied by higher risk of stroke and lower success rate of rhythm control. However, the microbial signatures of different categories of atrial fibrillation patients remain unknown. We sought to determine whether disordered gut microbiota occurs in the self-terminating PAF or intestinal flora develops dynamically during atrial fibrillation progression. We found that different types of atrial fibrillation show a limited degree of gut microbiota shift. Gut microbiota dysbiosis has already occurred in mild stages of atrial fibrillation, which might act as an early modulator of disease, and therefore may be regarded as a potential target to postpone atrial fibrillation progression.
Insights
Gut microbiota dysbiosis is present in both paroxysmal atrial fibrillation (PAF) and persistent atrial fibrillation (psAF). These changes occur early, suggesting gut microbiota as a potential target for preventing atrial fibrillation progression.
Area of Science:
- Microbiology
- Cardiology
- Metabolomics
Background:
- Gut microbiota dysbiosis and metabolic alterations are linked to atrial fibrillation (AF).
- Specific fecal microbiota changes in paroxysmal AF (PAF) and persistent AF (psAF) are not well-characterized.
- AF is a progressive disease with distinct clinical presentations.
Purpose of the Study:
- To comprehensively characterize gut microbiota signatures in PAF and psAF patients compared to non-AF controls.
- To investigate similarities and differences in gut microbiota composition, function, and associated metabolic patterns between AF types.
- To explore the potential role of specific microbial taxa and metabolites in atrial remodeling.
Main Methods:
- Metagenomic and metabolomic analyses were performed on fecal samples.
- Gut microbiota composition and diversity were assessed in 30 PAF patients, 20 psAF patients, and 50 non-AF controls.
- Differential taxa, microbial functions, and metabolic alterations were compared across groups.
Main Results:
- Both PAF and psAF patients exhibited similar gut microbiota alterations compared to controls, including elevated diversity and altered composition.
- A majority of differential taxa were shared between PAF and psAF patients.
- Minor disparities were observed between PAF and psAF, with some distinct taxa correlating with metabolites and atrial diameter.
Conclusions:
- Gut microbiota dysbiosis is a common feature in both early (PAF) and later stages (psAF) of atrial fibrillation.
- These findings highlight the potential of gut microbiota as an early modulator of AF.
- Targeting gut microbiota may offer a strategy for early intervention to postpone AF progression.
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