Practical laboratory considerations amidst the COVID-19 outbreak: early experience from Singapore
Shaun S Tan1, Benedict Yan2, Sharon Saw2
1National University Hospital, Singapore shaun_sy_tan@nuhs.edu.sg.
Insights
The coronavirus disease 2019 (COVID-19) pandemic required enhanced laboratory testing and stringent biosafety measures. This article shares early experiences managing COVID-19 laboratory testing challenges and offers practical considerations.
Area of Science:
- Infectious Diseases
- Virology
- Public Health
Background:
- The COVID-19 pandemic, caused by a novel coronavirus, emerged in late 2019.
- It is a global health emergency with rapid transmission and potential for severe respiratory illness.
- Singapore implemented enhanced surveillance and increased real-time PCR testing for suspected pneumonia cases.
Purpose of the Study:
- To share a tertiary institution's early experiences in managing the COVID-19 crisis.
- To provide practical considerations for laboratory testing during the pandemic.
- To address challenges in preanalytical, analytical, and postanalytical phases of testing.
Main Methods:
- Review of laboratory operations and biosafety protocols.
- Analysis of testing volumes and turnaround times.
- Evaluation of infectious control measures for patient samples.
Main Results:
- Increased testing led to significant implications for laboratory operations and personnel.
- Biosafety concerns necessitated stringent infectious control measures.
- Potential impact on routine testing turnaround times was observed.
Conclusions:
- Managing the COVID-19 crisis requires robust laboratory infrastructure and protocols.
- Adapting preanalytical, analytical, and postanalytical phases is crucial for effective testing.
- Early institutional experience provides valuable insights for pandemic preparedness.
Abstract:
The coronavirus disease 2019 (COVID-19) is a zoonotic viral infection originating from Wuhan, China in December 2019. The World Health Organization has classified this pandemic as a global health emergency due to its virulent nature of transmission, which may lead to acute respiratory distress syndrome. Singapore's health ministry has responded with enhanced surveillance of COVID-19 for all suspected pneumonia cases, further increasing the volume of testing via real-time reverse transcription PCR, as well as samples necessitating stringent infectious control. Collectively, this has implications on the total testing process, laboratory operations and its personnel due to biosafety concerns. Turnaround time for routine testing may also be affected. The aim of this article is to present our tertiary institution's early experience with managing this emerging crisis and offer practical considerations for the preanalytical, analytical and postanalytical phases of laboratory testing in this cohort of patients.
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