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Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
Published on: August 14, 2018
A complexity-based measure and its application to phylogenetic analysis
Xiaoqi Zheng1,2, Chun Li3, Jun Wang4,5
11Department of Applied Mathematics, Dalian University of Technology, Dalian, 116024 People's Republic of China.
Abstract:
In this article, we propose two well-defined distance metrics of biological sequences based on a universal complexity profile. To illustrate our metrics, phylogenetic trees of 18 Eutherian mammals from comparison of their mtDNA sequences and 24 coronaviruses using the whole genomes are constructed. The resulting monophyletic clusters agree well with the established taxonomic groups.
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