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Published on: August 2, 2024
Discovery of potential targets of Triptolide through inverse docking in ovarian cancer cells
Qinhang Wu1, Gang Bao1, Yang Pan1
1Department of Pharmacy, Nanjing University of Chinese Medicine, Nanjing, Jiangsu, China.
Abstract:
Triptolide (TPL) is proposed as an effective anticancer agent known for its anti-proliferation of a variety of cancer cells including ovarian cancer cells. Although some studies have been conducted, the mechanism by which TPL acts on ovarian cancer remains to be clearly described. Herein, systematic work based on bioinformatics was carried out to discover the potential targets of TPL in SKOV-3 cells. TPL induces the early apoptosis of SKOV-3 cells in a dose- and time-dependent manner with an IC50 = 40 ± 0.89 nM when cells are incubated for 48 h. Moreover, 20 nM TPL significantly promotes early apoptosis at a rate of 40.73%. Using a self-designed inverse molecular docking protocol, we fish the top 19 probable targets of TPL from the target library, which was built on 2,250 proteins extracted from the Protein Data Bank. The 2D-DIGE assay reveals that the expression of eight genes is affected by TPL. The results of western blotting and qRT-PCR assay suggest that 40 nM of TPL up-regulates the level of Annexin A5 (6.34 ± 0.07 fold) and ATP syn thase (4.08 ± 0.08 fold) and down-regulates the level of β-Tubulin (0.11 ± 0.12 fold) and HSP90 (0.21 ± 0.09 fold). More details of TPL affecting on Annexin A5 signaling pathway will be discovered in the future. Our results define some potential targets of TPL, with the hope that this agent could be used as therapy for the preclinical treatment of ovarian cancer.
Insights
Triptolide (TPL) effectively induces apoptosis in ovarian cancer cells. Bioinformatics identified potential TPL targets, revealing its anticancer mechanism and therapeutic potential for ovarian cancer treatment.
Area of Science:
- Pharmacology
- Molecular Biology
- Bioinformatics
Background:
- Triptolide (TPL) shows promise as an anticancer agent, particularly against ovarian cancer.
- The precise molecular mechanisms of TPL's action in ovarian cancer require further elucidation.
Purpose of the Study:
- To systematically identify potential molecular targets of TPL in SKOV-3 ovarian cancer cells using bioinformatics.
- To investigate the effects of TPL on apoptosis and gene expression in ovarian cancer cells.
Main Methods:
- Bioinformatics-based inverse molecular docking against a library of 2,250 proteins.
- 2D-difference gel electrophoresis (2D-DIGE) assay.
- Western blotting and quantitative real-time PCR (qRT-PCR) to validate gene expression changes.
Main Results:
- TPL induced dose- and time-dependent early apoptosis in SKOV-3 cells (IC50 = 40 ± 0.89 nM at 48h).
- Inverse docking identified 19 probable TPL targets.
- TPL modulated the expression of eight genes, notably up-regulating Annexin A5 and ATP synthase, and down-regulating β-Tubulin and HSP90.
Conclusions:
- This study defines potential molecular targets of TPL in ovarian cancer cells.
- The findings provide a foundation for TPL's potential use in preclinical ovarian cancer therapy.

