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Mining database for the expression and gene regulation network of JAK2 in skin cutaneous melanoma
Wancong Zhang1, Hanxing Zhao1, Jiasheng Chen1
1Department of Plastic Surgery and Burn Center, Second Affiliated Hospital, Shantou University Medical College, Shantou, Guangdong, China.
Background:
Skin cutaneous melanoma (SKCM) is the most common subtype of skin malignancy, with ever-increasing incidence, mortality, and disease burden. Dysregulation of JAK-STATs signaling pathway is involved in the pathogenesis and progression of cancers, thus affecting the prognosis of cancer patients. The function of JAKs in SKCM is still not clarified.
Methods:
A total of five online portal (GEPIA, TIMER, GeneMANIA, LinkedOmics, and GSCALite) is used to mine the expression and gene regulation network JAK2 in SKCM.
Results:
JAK2 expression was downregulated in SKCM and significantly associated with pathological stage and the prognosis of patients. The functions of JAK2 and associated genes were primarily involved in the DNA recombination, cell cycle checkpoint, metabolic process, NOD-like receptor signaling pathways, p53 signaling pathway and apoptosis. JAK2 level was significantly correlated with the abundance of immune cells and the level of immune biomarkers. Low expression of JAK2 were resistant to QL-VIII-58, TL-1-85, Ruxolitinib, TG101348 and Sunitinib.
Conclusions:
Our results reveal the expression and gene regulation network of JAK2 in skin cutaneous melanoma, providing more evidences about the role of JAK2 in carcinogenesis.
Insights
Janus kinase 2 (JAK2) is downregulated in skin cutaneous melanoma (SKCM), impacting patient prognosis and treatment response. This study clarifies JAK2's role in SKCM carcinogenesis and immune cell interactions.
Area of Science:
- Oncology
- Molecular Biology
- Immunology
Background:
- Skin cutaneous melanoma (SKCM) incidence is rising, with the Janus-STATs signaling pathway implicated in cancer progression.
- The specific role of Janus kinases (JAKs) in SKCM pathogenesis remains unclear.
- Understanding JAKs' function is crucial for improving SKCM patient outcomes.
Purpose of the Study:
- To investigate the expression and gene regulation network of JAK2 in SKCM.
- To elucidate the functional roles and prognostic significance of JAK2 in SKCM.
- To explore the relationship between JAK2 expression and the tumor immune microenvironment.
Main Methods:
- Utilized five online bioinformatics portals: GEPIA, TIMER, GeneMANIA, LinkedOmics, and GSCALite.
- Analyzed JAK2 expression patterns in SKCM tissues.
- Examined the gene regulatory network and functional associations of JAK2.
Main Results:
- JAK2 expression was significantly downregulated in SKCM.
- Downregulated JAK2 correlated with advanced pathological stage and poorer patient prognosis.
- JAK2 functions involve DNA recombination, cell cycle, metabolism, NOD-like receptor, p53 signaling, and apoptosis pathways.
- JAK2 levels associated with immune cell abundance and biomarkers.
- Low JAK2 expression predicted resistance to specific targeted therapies (QL-VIII-58, TL-1-85, Ruxolitinib, TG101348, Sunitinib).
Conclusions:
- JAK2 plays a significant role in SKCM development and progression.
- JAK2 expression patterns and its regulatory network offer insights into SKCM carcinogenesis.
- JAK2 may serve as a prognostic biomarker and a potential therapeutic target in SKCM.
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