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Updated: Dec 25, 2025

Assessment of Selective mRNA Translation in Mammalian Cells by Polysome Profiling
Published on: October 28, 2014
Disruption of the RNA modifications that target the ribosome translation machinery in human cancer
Maxime Janin1, Laia Coll-SanMartin1, Manel Esteller2,3,4,5
1Josep Carreras Leukaemia Research Institute (IJC), Badalona, Barcelona, Catalonia, Spain.
Abstract:
Genetic and epigenetic changes deregulate RNA and protein expression in cancer cells. In this regard, tumors exhibit an abnormal proteome in comparison to the corresponding normal tissues. Translation control is a crucial step in the regulation of gene expression regulation under normal and pathological conditions that ultimately determines cellular fate. In this context, evidence shows that transfer and ribosomal RNA (tRNA and rRNA) modifications affect the efficacy and fidelity of translation. The number of RNA modifications increases with the complexity of organisms, suggesting an evolutionary diversification of the possibilities for fine-tuning the functions of coding and non-coding RNAs. In this review, we focus on alterations of modifications of transfer and ribosomal RNA that affect translation in human cancer. This variation in the RNA modification status can be the result of altered modifier expression (writers, readers or erasers), but also due to components of the machineries (C/D or H/ACA boxes) or alterations of proteins involved in modifier expression. Broadening our understanding of the mechanisms by which site-specific modifications modulate ribosome activity in the context of tumorigenesis will enable us to enrich our knowledge about how ribosomes can influence cell fate and form the basis of new therapeutic opportunities.
Insights
Altered transfer RNA (tRNA) and ribosomal RNA (rRNA) modifications impact translation in cancer. Understanding these RNA changes offers new therapeutic strategies for cancer treatment.
Area of Science:
- Molecular Biology
- Cancer Research
- Epigenetics
Background:
- Cancer cells exhibit abnormal proteomes due to genetic and epigenetic alterations affecting RNA and protein expression.
- Translation control is critical for gene expression regulation, influencing cellular fate under normal and pathological conditions.
- Transfer RNA (tRNA) and ribosomal RNA (rRNA) modifications are essential for translation efficacy and fidelity, with increasing complexity across organisms.
Purpose of the Study:
- To review alterations in tRNA and rRNA modifications affecting translation in human cancer.
- To explore how changes in RNA modification status contribute to tumorigenesis.
- To identify potential therapeutic opportunities based on a deeper understanding of RNA modification in cancer.
Main Methods:
- Literature review focusing on alterations in tRNA and rRNA modifications in human cancer.
- Analysis of mechanisms involving modifier expression (writers, readers, erasers) and their impact on translation.
- Examination of the role of RNA modification machinery components (C/D or H/ACA boxes) and associated proteins.
Main Results:
- Tumors display aberrant tRNA and rRNA modification patterns compared to normal tissues.
- Altered RNA modification status in cancer can stem from changes in modifier enzymes or RNA processing machinery.
- These modifications directly influence ribosome activity and translation fidelity in the context of cancer.
Conclusions:
- Dysregulated tRNA and rRNA modifications are significant in human cancer, impacting translation.
- Understanding these modifications provides insights into ribosome function in tumorigenesis.
- Targeting RNA modification pathways presents a promising avenue for novel cancer therapeutics.
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