Related Experiment Video
Updated: Dec 24, 2025

09:33
In Vitro Assay to Measure Phosphatidylethanolamine Methyltransferase Activity
Published on: January 5, 2016
10.1K
Structural characterization of human O-phosphoethanolamine phospho-lyase
Chiara Vettraino1, Alessio Peracchi2, Stefano Donini1
1Center for Nano Science and Technology @PoliMi, Istituto Italiano di Tecnologia, Via Pascoli 70/3, 20133 Milano, Italy.
Summary
Human O-phosphoethanolamine phospho-lyase (hEtnppl) breaks down O-phosphoethanolamine (PEA). The crystal structure reveals its fold and active site, aiding in its complete characterization.
Area of Science:
- Biochemistry
- Structural Biology
- Enzymology
Background:
- Human O-phosphoethanolamine phospho-lyase (hEtnppl) is a pyridoxal 5'-phosphate-dependent enzyme.
- hEtnppl plays a physiological role in phospholipid metabolism via the CDP-ethanolamine (Kennedy) pathway.
Purpose of the Study:
- To determine the crystal structure of human O-phosphoethanolamine phospho-lyase (hEtnppl).
- To characterize the structure of hEtnppl in complex with pyridoxamine 5'-phosphate.
Main Methods:
- Crystal structure determination using molecular replacement.
- Resolution of 2.05 Å.
Main Results:
- The crystal structure of hEtnppl in complex with pyridoxamine 5'-phosphate was determined.
- Structural analysis showed shared general fold and active-site residue arrangement with Arthrobacter aurescens TC1 A1RDF1.
- The structure provides insights into the enzyme's active site.
Conclusions:
- The determined crystal structure offers novel information for the complete characterization of human O-phosphoethanolamine phospho-lyase.
- Structural data can guide further studies on hEtnppl function and inhibition.
Related Concept Videos
Protein Kinases and Phosphatases
14.7K
Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
14.7K
Protein Kinases and Phosphatases
4.2K
4.2K
Phosphorylation
53.4K
The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
53.4K
Phosphodiester Linkages
109.3K
Overview
Phosphodiester bond forms when a phosphoric acid molecule (H3PO4) links with two hydroxyl groups (–OH) of two other molecules, forming two ester bonds. Two water molecules are released in this process. The phosphodiester bond is commonly found in nucleic acids (DNA and RNA) and plays a critical role in their structure and function.
Phosphodiester Bonds Link Nucleotides Together
DNA and RNA are polynucleotides or long chains of nucleotides that are linked together. A nucleotide is...
Phosphodiester bond forms when a phosphoric acid molecule (H3PO4) links with two hydroxyl groups (–OH) of two other molecules, forming two ester bonds. Two water molecules are released in this process. The phosphodiester bond is commonly found in nucleic acids (DNA and RNA) and plays a critical role in their structure and function.
Phosphodiester Bonds Link Nucleotides Together
DNA and RNA are polynucleotides or long chains of nucleotides that are linked together. A nucleotide is...
109.3K
Synthesis of Phosphatidylcholine in the ER Membrane
3.9K
The ER synthesizes lipids for building cell membranes and performing cellular functions such as energy storage and signaling. The lipid synthesis machinery embedded in the ER membrane primarily collects all reactants from the cytosol. Following synthesis, the secretory pathway and the ER contact sites distribute these lipids to other cellular organelles. Additionally, the energy-rich triacylglycerides are transported from the ER via lipid droplets.
The major components of all eukaryotic cell...
The major components of all eukaryotic cell...
3.9K
Enzymes
92.2K
Inside living organisms, enzymes act as catalysts for many biochemical reactions involved in cellular metabolism. The role of enzymes is to reduce the activation energies of biochemical reactions by forming complexes with its substrates. The lowering of activation energies favor an increase in the rates of biochemical reactions.
Enzyme deficiencies can often translate into life-threatening diseases. For example, a genetic abnormality resulting in the deficiency of the enzyme G6PD...
Enzyme deficiencies can often translate into life-threatening diseases. For example, a genetic abnormality resulting in the deficiency of the enzyme G6PD...
92.2K

