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Area of Science:

  • Genomics
  • Bioinformatics
  • Plant Science

Background:

  • Coriander (Coriandrum sativum L.) and carrot are key Apiaceae family models.
  • Understanding their genomic evolution is crucial for the family.

Purpose of the Study:

  • To develop a comprehensive genomics database for coriander and carrot.
  • To facilitate comparative genomic and evolutionary analyses within the Apiaceae family.

Main Methods:

  • Development of the Coriander Genomics Database (CGDB) integrating genomic, transcriptomic, and metabolic data.
  • Comparative analysis of transcription factor families between coriander and carrot genomes.
  • Identification and analysis of tubby (TUB) protein family genes.

Main Results:

  • CGDB provides a centralized platform for Apiaceae genomic data.
  • Seven transcription factor families, notably MADS, showed significantly more members in coriander than carrot.
  • 17 TUB family genes were identified, with comparative and evolutionary analyses performed.

Conclusions:

  • CGDB is a valuable resource for Apiaceae comparative genomics and evolutionary research.
  • Differences in TF family size may reflect distinct evolutionary trajectories.
  • The database supports functional genomic studies and aids the scientific community.