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Updated: Dec 24, 2025

Picometer-Precision Atomic Position Tracking through Electron Microscopy
Published on: July 3, 2021
Tracking the picoscale spatial motion of atomic columns during dynamic structural change.
Barnaby D A Levin1, Ethan L Lawrence1, Peter A Crozier1
1School for Engineering of Matter, Transport, and Energy, Arizona State University, AZ, USA.
A new Gaussian fitting algorithm tracks atomic column positions and intensities in high-speed transmission electron microscopy (TEM) image series. This method enables the study of dynamic atomic structural changes in materials with millisecond resolution.
Area of Science:
- Materials Science
- Nanotechnology
- Microscopy
Background:
- Characterizing dynamic atomic structural changes in materials is crucial for understanding functionality, especially in catalytic nanoparticles.
- Advancements in direct electron detection enable high-speed imaging (1000 frames/sec) in bright-field transmission electron microscopy (BF TEM), offering millisecond temporal resolution for atomic structure analysis.
Purpose of the Study:
- To develop and validate computational methods for analyzing large, noisy datasets from high-speed TEM image series.
- To present a robust two-dimensional Gaussian fitting algorithm for tracking atomic columns in temporally resolved BF TEM data.
Main Methods:
- Developed a two-dimensional Gaussian fitting algorithm to track atomic column positions and intensities.
- Applied the algorithm to experimental BF TEM image series of ceria (CeO2) nanoparticle surfaces.
- Compared the algorithm's accuracy for position and intensity measurements against traditional centroid fitting and evaluated performance as a function of electron beam dose.
Main Results:
- The Gaussian fitting algorithm accurately tracks atomic column positions and intensities in high-speed TEM image series.
- Accuracy of position localization was compared to centroid fitting.
- Intensity measurement accuracy was evaluated across a range of electron beam doses per frame (125-5000 e-/Ų).
Conclusions:
- The developed Gaussian fitting algorithm provides a reliable method for analyzing dynamic atomic structural changes in materials using high-speed TEM.
- The methodology and code are broadly applicable to other temporally resolved TEM datasets for tracking atomic column dynamics.
- This work facilitates a deeper understanding of material functionality through precise characterization of atomic-level dynamics.
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