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Published on: August 12, 2015
BRCA1 promoter methylation in breast cancer patients is associated with response to olaparib/eribulin combination
Asuka Kawachi1,2, Satoshi Yamashita1, Eriko Okochi-Takada1
1Division of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Background:
A PARP inhibitor is effective in breast cancer patients with BRCA1/2 germline mutations, and in cell lines with BRCA1 promoter methylation. However, its efficacy in breast cancer patients with BRCA1 promoter methylation is still unknown.
Methods:
Biopsy samples were obtained from 32 triple-negative breast cancer (TNBC) patients treated with eribulin/olaparib combination therapy in a clinical trial (UMINID: 000009498) and analyzed for their mutations by FoundationOne CDx. DNA methylation was evaluated by quantitative methylation-specific PCR and bisulfite sequencing, and its level was adjusted for tumor cell fraction.
Results:
Among 20 TNBC patients evaluable for both methylation and mutations, one (5%) and five (25%) patients had a high (> 80%) and low (30-80%) BRCA1 promoter methylation levels, respectively. One patient with a high methylation level, also having a BRCA2 mutation of unknown significance, displayed complete response. Among the 5 patients with low methylation levels, only one patient with a BRCA2 mutation of unknown significance displayed long-lasting disease control (24 weeks). Patients with a BRCA1 or BRCA2 mutation, or high BRCA1 promoter methylation showed better 6-month progression-free survival (PFS) compared with the other patients (P = 0.009).
Conclusion:
Quantitative methylation analysis suggested that addition of homozygous BRCA1 promoter methylation to mutations may more accurately identify TNBC patients who would benefit from olaparib/eribulin combination therapy. (209 words).
Insights
Poly (ADP-ribose) polymerase (PARP) inhibitors show promise for triple-negative breast cancer (TNBC) patients with BRCA mutations. High BRCA1 promoter methylation combined with mutations may identify TNBC patients who benefit from olaparib/eribulin therapy.
Area of Science:
- Oncology
- Genetics
- Pharmacology
Background:
- PARP inhibitors are effective in breast cancer with BRCA1/2 germline mutations.
- Efficacy of PARP inhibitors in breast cancer with BRCA1 promoter methylation is not well-established.
- Triple-negative breast cancer (TNBC) presents unique treatment challenges.
Purpose of the Study:
- To investigate the efficacy of olaparib/eribulin combination therapy in TNBC patients.
- To evaluate the role of BRCA1 promoter methylation in predicting treatment response.
- To identify biomarkers for selecting TNBC patients who benefit from PARP inhibition.
Main Methods:
- Analysis of biopsy samples from 32 TNBC patients treated with eribulin/olaparib.
- Mutation analysis using FoundationOne CDx.
- Quantitative methylation-specific PCR and bisulfite sequencing for BRCA1 promoter methylation levels.
Main Results:
- One of 20 evaluable TNBC patients had high BRCA1 promoter methylation (>80%) and achieved complete response.
- Five patients had low BRCA1 promoter methylation (30-80%); one with a BRCA2 mutation showed long-term disease control (24 weeks).
- Patients with BRCA1/2 mutations or high BRCA1 promoter methylation demonstrated improved 6-month progression-free survival (PFS) (P=0.009).
Conclusions:
- Quantitative methylation analysis suggests that homozygous BRCA1 promoter methylation combined with mutations may better identify TNBC patients responsive to olaparib/eribulin.
- BRCA1 promoter methylation status is a potential predictive biomarker for PARP inhibitor therapy in TNBC.
- Further research is warranted to validate these findings and optimize treatment strategies for TNBC.
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