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Convolutional Neural Network With Graphical Lasso to Extract Sparse Topological Features for Brain Disease

Junzhong Ji, Yao Yao

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    |April 24, 2020
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    This study introduces a novel CNN-GLasso model for brain disease classification using sparse connectivity patterns. The model enhances feature extraction, improving diagnostic accuracy and identifying key brain regions.

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    Area of Science:

    • Neuroscience
    • Machine Learning
    • Medical Image Analysis

    Background:

    • Functional connectivity analysis offers network-level insights into brain mechanisms and serves as a biomarker for brain disease classification.
    • Machine learning, particularly convolutional neural networks (CNNs), is increasingly used for functional connectivity classification due to their ability to extract topological features.
    • Conventional CNN methods overlook sparse connectivity patterns (SCPs), potentially leading to feature redundancy and limiting performance.

    Purpose of the Study:

    • To propose a novel CNN-based model incorporating graphical Lasso (CNNGLasso) for extracting sparse topological features.
    • To address the limitations of conventional CNNs by considering SCPs for improved brain disease classification.
    • To enhance the performance and generalization of brain network analysis in disease classification.

    Main Methods:

    • Development of a novel graphical Lasso model to identify group-level SCPs.
    • Utilizing SCPs to guide the extraction of topological features within brain networks.
    • Application of the extracted sparse topological features for classifying patients from normal controls using a CNN framework.

    Main Results:

    • The CNNGLasso model demonstrated superior performance compared to existing methods on the ABIDE dataset.
    • The model successfully extracted sparse topological features, improving classification accuracy.
    • Identified abnormal brain regions aligned with previous research findings, validating the model's clinical relevance.

    Conclusions:

    • The proposed CNNGLasso model effectively extracts sparse topological features for brain disease classification.
    • Incorporating SCPs enhances the performance and generalization of CNN-based brain network analysis.
    • The CNNGLasso model shows significant promise for clinical applications in diagnosing brain disorders.