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Leveraging shared connectivity to aggregate heterogeneous datasets into a common response space.

Samuel A Nastase1, Yun-Fei Liu2, Hanna Hillman3

  • 1Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.

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|April 24, 2020
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Summary

This study introduces a connectivity-based shared response model to create a unified functional magnetic resonance imaging (fMRI) space from diverse datasets. This approach enhances cross-subject analysis of brain activity during naturalistic stimuli.

Keywords:
Data harmonizationFunctional connectivityHyperalignmentNaturalistic stimulifMRI

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Area of Science:

  • Neuroimaging
  • Computational Neuroscience
  • Data Science

Background:

  • Estimating shared neural response spaces across disparate functional magnetic resonance imaging (fMRI) datasets is challenging.
  • Existing methods struggle to integrate heterogeneous data while accounting for individual functional topographies.

Purpose of the Study:

  • To develop and evaluate a connectivity-based shared response model for unifying fMRI data.
  • To improve cross-subject analysis and information dimensionality within a shared neural space.
  • To enable robust semantic encoding models across diverse datasets.

Main Methods:

  • Factorization of aggregated fMRI datasets into a shared connectivity space and subject-specific transformations.
  • Projection of individual response time series into the estimated shared space.
  • Evaluation using heterogeneous, naturalistic fMRI data from spoken story listening tasks.

Main Results:

  • Projecting data into the shared space significantly improved between-subject classification of story segments.
  • The dimensionality of shared information across subjects increased substantially.
  • Generalizable improvements were observed for subjects and stories not used in model estimation.
  • Shared semantic encoding models showed enhanced performance.

Conclusions:

  • The connectivity-based shared response model effectively creates a consensus neural space from diverse fMRI datasets.
  • This approach leverages shared connectivity patterns to resolve individual differences and enhance cross-subject comparability.
  • The method offers a powerful tool for analyzing complex, naturalistic brain data.