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Updated: Dec 23, 2025

Detection of Low Copy Number Integrated Viral DNA Formed by In Vitro Hepatitis B Infection
Published on: November 7, 2018
Existence of hepatitis B virus surface protein mutations and other variants: demand for hepatitis B infection control
Ko Ko1, Kazuaki Takahashi1, Shintaro Nagashima1
1Department of Epidemiology, Infectious Disease Control and Prevention, Hiroshima University Graduate School of Biomedical and Health Sciences, Japan; 1-2-3 Kasumi, Minami-ku, Hiroshima, 734-8551, Japan.
Insights
Dried blood spots (DBS) effectively detect Hepatitis B virus (HBV) genome sequences nationwide. This molecular epidemiology study provides crucial data for controlling HBV transmission, especially mother-to-child, in Cambodia.
Area of Science:
- Virology
- Molecular Epidemiology
- Public Health
Background:
- Hepatitis B virus (HBV) infection remains a significant public health concern globally.
- Accurate, up-to-date epidemiological data is essential for effective infection control and surveillance strategies.
- Dried blood spot (DBS) sampling offers a viable method for large-scale molecular studies, particularly in resource-limited settings.
Purpose of the Study:
- To detect HBV genome sequences and variants nationwide in Cambodia using DBS samples.
- To generate current reference data for HBV infection control and surveillance.
- To assess the utility of DBS for large-scale molecular epidemiological studies of HBV.
Main Methods:
- Utilized DBS samples from a nationwide sero-survey of mothers and children in Cambodia.
- Extracted HBV DNA from DBS samples and performed polymerase chain reaction (PCR).
- Analyzed partial and full-length HBV genomes to determine genotypes and identify variants.
Main Results:
- Identified HBsAg positive rates of 4.7% in mothers and 0.52% in children.
- Genotype C was predominant (80.49%), with Genotype B found in border regions (19.51%).
- Detected S gene mutants in 24.29% of mothers and 16.67% of children; identified recombinant Genotype B strains and mutations in the core promoter region of HBV C1 strains.
Conclusions:
- Dried blood spots (DBS) are suitable for large-scale molecular epidemiological studies of HBV in resource-limited countries.
- Full-genome sequencing enhances understanding of HBV sub-genotypes, variants, and mother-to-child transmission.
- Findings necessitate improved strategies for preventing and controlling mother-to-child HBV transmission in Cambodia.
Background:
This study aimed to detect Hepatitis B virus (HBV) genome sequences and their variants as of nationwide scale using dried blood spot (DBS) samples and to provide up-to-date reference data for infection control and surveillance in Cambodia.
Method:
Among 2518 children age 5-7 years and their 2023 mothers participated in 2017 Cambodia nationwide sero-survey on hepatitis B surface antigen (HBsAg) prevalence using multistage random sampling strategy, 95 mothers and 13 children positive to HBsAg were included in this study. HBV DNA was extracted from DBS, then performed polymerase chain reaction. HBV genotypes and potential variants were examined by partial and full length genomic analysis.
Results:
HBsAg positive rate was 4.7% (95/2023) in mothers and 0.52% (13/2518) in their children. Genotype C (80.49%) was abundantly found throughout the whole Cambodia whilst genotype B (19.51%) was exclusively found in regions bordering Vietnam. S gene mutants of HBV were found in 24.29% of mothers and 16.67% of children with HBV DNA positive sera. Full-length genome analysis revealed the homology of 99.62-100% in each mother-child pair. Genotype B was clarified to recombinant genotype B4/C2 and B2/C2. Double (48.39%) and combination mutation (32.26%) were observed in core promoter region of HBV C1 strains.
Conclusions:
This study showed the capable of DBS for large-scale molecular epidemiological study of HBV in resource limited countries. Full-genome sequences yield the better understanding of sub-genotypes, their variants and the degree of homology between strains isolated from mother-child pairs calls for effective strategies on prevention, control and surveillance of mother-to-child HBV transmission in Cambodia.
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