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Updated: Dec 23, 2025

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Published on: May 14, 2016
Treating Cancer by Spindle Assembly Checkpoint Abrogation: Discovery of Two Clinical Candidates, BAY 1161909 and BAY
Volker K Schulze1, Ulrich Klar1, Dirk Kosemund1
1Research & Development, Pharmaceuticals, Bayer AG, 13353 Berlin, Germany.
Abstract:
Inhibition of monopolar spindle 1 (MPS1) kinase represents a novel approach to cancer treatment: instead of arresting the cell cycle in tumor cells, cells are driven into mitosis irrespective of DNA damage and unattached/misattached chromosomes, resulting in aneuploidy and cell death. Starting points for our optimization efforts with the goal to identify MPS1 inhibitors were two HTS hits from the distinct chemical series "triazolopyridines" and "imidazopyrazines". The major initial issue of the triazolopyridine series was the moderate potency of the HTS hits. The imidazopyrazine series displayed more than 10-fold higher potencies; however, in the early project phase, this series suffered from poor metabolic stability. Here, we outline the evolution of the two hit series to clinical candidates BAY 1161909 and BAY 1217389 and reveal how both clinical candidates bind to the ATP site of MPS1 kinase, while addressing different pockets utilizing different binding interactions, along with their synthesis and preclinical characterization in selected in vivo efficacy models.
Insights
Novel cancer therapy targets monopolar spindle 1 (MPS1) kinase, driving cancer cells to self-destruct. Optimization of triazolopyridine and imidazopyrazine compounds led to clinical candidates BAY 1161909 and BAY 1217389.
Area of Science:
- Oncology
- Molecular Biology
- Medicinal Chemistry
Background:
- Monopolar spindle 1 (MPS1) kinase is a key regulator of mitosis.
- Inhibition of MPS1 offers a novel cancer treatment strategy by inducing aneuploidy and cell death.
- Targeting MPS1 bypasses cell cycle arrest, irrespective of DNA damage or chromosome attachment issues.
Purpose of the Study:
- To optimize initial HTS hits from triazolopyridine and imidazopyrazine series into clinical candidates.
- To characterize the binding interactions of novel MPS1 inhibitors with the kinase's ATP site.
- To evaluate the preclinical efficacy of developed MPS1 inhibitors in vivo.
Main Methods:
- Hit-to-lead optimization of two distinct chemical series (triazolopyridines and imidazopyrazines).
- Structure-based drug design and medicinal chemistry approaches to enhance potency and metabolic stability.
- Biochemical assays to confirm binding to the MPS1 ATP site and assess inhibitory activity.
- Preclinical in vivo efficacy studies in relevant cancer models.
Main Results:
- Successful evolution of both series, addressing initial challenges of moderate potency (triazolopyridines) and poor metabolic stability (imidazopyrazines).
- Identification of clinical candidates BAY 1161909 and BAY 1217389 with distinct binding modes within the MPS1 ATP site.
- Demonstration of potent MPS1 inhibition and promising preclinical efficacy in vivo.
Conclusions:
- BAY 1161909 and BAY 1217389 represent promising clinical candidates for MPS1-targeted cancer therapy.
- The distinct binding strategies highlight the versatility of targeting the MPS1 ATP pocket.
- Further clinical development is warranted based on the preclinical data and novel mechanism of action.
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