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Updated: Dec 23, 2025

Method for Identifying Small Molecule Inhibitors of the Protein-protein Interaction Between HCN1 and TRIP8b
Published on: November 11, 2016
The HCN domain is required for HCN channel cell-surface expression and couples voltage- and cAMP-dependent gating
Ze-Jun Wang1, Ismary Blanco2, Sebastien Hayoz1
1Department of Pharmacology and Physiology, Georgetown University Medical Center, Washington, D. C., USA.
Insights
The HCN domain (HCND) is crucial for HCN channel surface expression and links voltage sensing to cyclic nucleotide activation. Disrupting HCND interactions affects channel function and gating.
Area of Science:
- Molecular and Cellular Neuroscience
- Ion Channel Physiology
- Structural Biology
Background:
- Hyperpolarization-activated cyclic nucleotide-gated (HCN) channels regulate crucial physiological processes like synaptic plasticity and cardiac rhythm.
- HCN channel gating is controlled by membrane voltage and intracellular cyclic nucleotides (cNMPs).
- The precise coupling mechanism between voltage- and cNMP-dependent gating remained elusive.
Purpose of the Study:
- To investigate the functional significance of the novel HCN domain (HCND) identified in HCN channels.
- To elucidate the role of HCND in HCN channel expression and gating.
Main Methods:
- Investigated HCN2 channel function through site-directed mutagenesis targeting specific residues.
- Assessed channel surface expression and currents in response to mutations.
- Analyzed structural interactions between HCND, voltage-sensing domain (VSD), and C-linker-CNBD based on cryo-EM data.
Main Results:
- Deletion of HCND abolished surface expression of HCN2 channels.
- Mutations disrupting VSD-HCND interactions abolished HCN2 currents.
- Mutations disrupting HCND-C-linker-CNBD interactions altered both voltage- and cAMP-dependent gating.
Conclusions:
- The HCND is essential for the cell-surface expression of HCN channels.
- The HCND acts as a critical structural linker, mediating the functional coupling between voltage- and cyclic nucleotide-dependent gating mechanisms in HCN channels.
Abstract:
Hyperpolarization-activated cyclic nucleotide-gated (HCN) channels are major regulators of synaptic plasticity and rhythmic activity in the heart and brain. Opening of HCN channels requires membrane hyperpolarization and is further facilitated by intracellular cyclic nucleotides (cNMPs). In HCN channels, membrane hyperpolarization is sensed by the membrane-spanning voltage sensor domain (VSD), and the cNMP-dependent gating is mediated by the intracellular cyclic nucleotide-binding domain (CNBD) connected to the pore-forming S6 transmembrane segment via the C-linker. Previous functional analysis of HCN channels has suggested a direct or allosteric coupling between the voltage- and cNMP-dependent activation mechanisms. However, the specifics of this coupling remain unclear. The first cryo-EM structure of an HCN1 channel revealed that a novel structural element, dubbed the HCN domain (HCND), forms a direct structural link between the VSD and C-linker-CNBD. In this study, we investigated the functional significance of the HCND. Deletion of the HCND prevented surface expression of HCN2 channels. Based on the HCN1 structure analysis, we identified Arg237 and Gly239 residues on the S2 of the VSD that form direct interactions with Ile135 on the HCND. Disrupting these interactions abolished HCN2 currents. We also identified three residues on the C-linker-CNBD (Glu478, Gln482, and His559) that form direct interactions with residues Arg154 and Ser158 on the HCND. Disrupting these interactions affected both voltage- and cAMP-dependent gating of HCN2 channels. These findings indicate that the HCND is necessary for the cell-surface expression of HCN channels and provides a functional link between voltage- and cAMP-dependent mechanisms of HCN channel gating.
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