Related Experiment Video
Updated: Dec 22, 2025

Generation of Escape Variants of Neutralizing Influenza Virus Monoclonal Antibodies
Published on: August 29, 2017
Emergence of Drift Variants That May Affect COVID-19 Vaccine Development and Antibody Treatment
Takahiko Koyama1, Dilhan Weeraratne2, Jane L Snowdon2
1TJ Watson Research Center, IBM, Yorktown Heights, NY 10598, USA.
Abstract:
New coronavirus (SARS-CoV-2) treatments and vaccines are under development to combat COVID-19. Several approaches are being used by scientists for investigation, including (1) various small molecule approaches targeting RNA polymerase, 3C-like protease, and RNA endonuclease; and (2) exploration of antibodies obtained from convalescent plasma from patients who have recovered from COVID-19. The coronavirus genome is highly prone to mutations that lead to genetic drift and escape from immune recognition; thus, it is imperative that sub-strains with different mutations are also accounted for during vaccine development. As the disease has grown to become a pandemic, B-cell and T-cell epitopes predicted from SARS coronavirus have been reported. Using the epitope information along with variants of the virus, we have found several variants which might cause drifts. Among such variants, 23403A>G variant (p.D614G) in spike protein B-cell epitope is observed frequently in European countries, such as the Netherlands, Switzerland, and France, but seldom observed in China.
Insights
Scientists are developing new treatments and vaccines for COVID-19 by investigating small molecules and antibodies. They identified a specific SARS-CoV-2 spike protein mutation (D614G) prevalent in Europe, crucial for vaccine development.
Area of Science:
- Virology
- Immunology
- Vaccinology
Background:
- The COVID-19 pandemic necessitates the development of effective treatments and vaccines.
- The SARS-CoV-2 virus genome is susceptible to mutations, leading to genetic drift and potential immune evasion.
- Understanding viral variants is critical for successful vaccine design.
Purpose of the Study:
- To investigate novel therapeutic strategies against SARS-CoV-2.
- To analyze viral mutations and their impact on immune recognition for vaccine development.
- To identify specific SARS-CoV-2 variants relevant to global vaccine efforts.
Main Methods:
- Exploration of small molecule inhibitors targeting viral enzymes (RNA polymerase, protease, endonuclease).
- Investigation of therapeutic antibodies derived from convalescent COVID-19 plasma.
- Analysis of predicted B-cell and T-cell epitopes from SARS coronavirus in conjunction with viral variants.
Main Results:
- Several SARS-CoV-2 variants with potential for immune drift were identified.
- A specific mutation, 23403A>G (p.D614G) in a spike protein B-cell epitope, was frequently observed in European populations.
- This D614G variant was seldom observed in China, suggesting geographical prevalence.
Conclusions:
- The identified SARS-CoV-2 variants, particularly the D614G mutation, require consideration in vaccine development strategies.
- Geographical distribution of viral strains highlights the need for adaptable vaccine approaches.
- Continued monitoring of viral mutations is essential for combating the COVID-19 pandemic.
More Related Videos
Related Concept Videos
Cross-reactivity
Genetic Drift
Development of Antibiotic Resistance
Viral Mutations
Microorganisms in Medicine and Therapeutics
Diversity of Antigen Receptors
Before encountering any antigen, lymphocytes express these receptors. On B cells, the antigen receptor is a membrane-bound antibody molecule called BCR; on T cells, it is a T cell receptor or TCR. B and T cell receptors are composed of two...

