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Updated: Dec 22, 2025

3D Cine Magnetic Resonance Imaging of Respiratory Motion in Mechanically Ventilated Mice and Rats
Published on: September 19, 2025
Respiratory motion compensation using data binning in dynamic contrast enhanced golden-angle radial MRI
Iram Shahzadi1, Muhammad Faisal Siddiqui1, Ibtisam Aslam2
1Medical Image Processing Research Group (MIPRG), Department of Electrical and Computer Engineering, COMSATS University Islamabad, Islamabad 45550, Pakistan.
Abstract:
GRASP (Golden-Angle Radial Sparse Parallel MRI) is a data acquisition and reconstruction technique that combines parallel imaging and golden-angle radial sampling. The continuously acquired free breathing Dynamic Contrast Enhanced (DCE) golden-angle radial MRI data of liver and abdomen has artifacts due to respiratory motion, resulting in low vessel-tissue contrast that makes GRASP reconstructed images less suitable for diagnosis. In this paper, DCE golden-angle radial MRI data of abdomen and liver perfusion is sorted into different motion states using the self-gating property of radial acquisition and then reconstructed using GRASP. Three methods of amplitude-based data binning namely uniform binning, adaptive binning and optimal binning are applied on the DCE golden-angle radial data to extract different motion states and a comparison is performed with the conventional GRASP reconstruction. Also, a comparison among the amplitude-based data binning techniques is performed and benefits of each of these binning techniques are discussed from a clinical perspective. The image quality assessment in terms of hepatic vessel clarity, liver edge sharpness, contrast enhancement clarity and streaking artifacts is performed by a certified radiologist. The results show that DCE golden-angle radial trajectories benefit from all the three types of amplitude-based data binning methods providing improved reconstruction results. The choice of binning technique depends upon the clinical application e.g. uniform and adaptive binning are helpful for a detailed analysis of lesion characteristic and contrast enhancement in different motion states while optimal binning can be used when clinical analysis requires a single image per contrast enhancement phase with no motion blurring artifacts.
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