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Updated: Dec 22, 2025

Simultaneous PET/MRI Imaging During Mouse Cerebral Hypoxia-ischemia
Published on: September 20, 2015
Practical issues and limitations of brain attenuation correction on a simultaneous PET-MR scanner
J E Mackewn1, J Stirling2, S Jeljeli2
1King's College London and Guy's and St Thomas' PET Centre, School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK. jane.mackewn@kcl.ac.uk.
Accurate brain PET-MR imaging requires careful attenuation correction. Dense hair and headphones significantly impact results, while CT conversion and head coil padding have minimal effects. Practical solutions are presented to improve PET quantification.
Area of Science:
- Medical Imaging
- Nuclear Medicine
- Radiology
Background:
- Clinical PET-MR imaging, despite its routine use since 2011, faces challenges in attenuation correction.
- Issues affecting brain PET-MR accuracy include CT-to-PET conversion, MR head coil padding, hair, and headphones.
Purpose of the Study:
- To investigate the impact of specific factors on the reliability and accuracy of brain PET-MR attenuation correction.
- To evaluate practical solutions for mitigating identified issues in clinical and research settings.
Main Methods:
- Examined the effect of CT Hounsfield unit conversion to 511 keV linear attenuation coefficients.
- Assessed the influence of MR head coil padding, dense hair, and headphones on reconstructed PET images.
- Evaluated practical mitigating measures for each identified issue.
Main Results:
- CT data conversion is feasible using vendor-specific methods; head coil padding has minimal effect.
- Dense hair significantly impacts reconstructed PET images (>10% error).
- Headphones cause substantial errors if not included in attenuation maps, but scanning without them may be acceptable based on sound levels.
Conclusions:
- Limitations in PET-MR attenuation correction must be considered for accurate brain PET quantification in research and clinical protocols.
- Dense hair, headphones, and independent CT scans can cause non-negligible PET quantification errors.
- Pragmatic approaches can minimize these effects, though they add complexity compared to PET-CT.
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