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Measuring Efficiency of Semi-automated Brain Tumor Segmentation by Simulating User Interaction
David Gering1, Aikaterini Kotrotsou1, Brett Young-Moxon1
1HealthMyne Inc., Madison, WI, United States.
Frontiers in Computational Neuroscience
|May 7, 2020
Summary
This study introduces an efficient algorithm for brain tumor segmentation, significantly reducing radiologist interaction time. The new method achieves accurate volumetric segmentation in an average of 46 seconds.
Area of Science:
- Medical Imaging
- Radiology
- Computational Biology
Background:
- Traditional tumor extent quantification relies on crude 2D measurements, lacking volumetric accuracy.
- Algorithmic segmentation methods offer potential for improved accuracy but vary in required radiologist interaction levels.
Purpose of the Study:
- To evaluate an algorithm designed for brain tumor segmentation with varying degrees of radiologist interaction.
- To assess the accuracy and efficiency of the interactive segmentation algorithm.
Main Methods:
- A computer simulation utilized the BraTS dataset (285 patients, multi-spectral MR) with ground-truth tumor delineations.
- Radiologist interaction (clicks and drags) was mimicked in real-time, guided by segmentation deviations from the ground-truth.
- Accuracy and time efficiency were measured across different interaction levels.
Main Results:
- The algorithm demonstrated varying levels of accuracy depending on the degree of radiologist interaction.
- The average total time for study loading to 3D contour confirmation was 46 seconds.
- Interactive segmentation significantly improved efficiency compared to traditional methods.
Conclusions:
- The developed algorithm offers an efficient and accurate approach to brain tumor volumetric segmentation.
- Real-time interaction allows for tailored radiologist involvement, optimizing both accuracy and speed.
- This method has the potential to streamline radiological workflows for brain tumor analysis.

