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Updated: Dec 22, 2025

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Systems approach to rational combination therapy: PARP inhibitors
Chaoyang Sun1, Yong Fang2, Marilyne Labrie2
1Department of Obstetrics and Gynecology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China.
Abstract:
Poly (ADP-ribose) polymerase inhibitors (PARPi) have demonstrated activity across a broad spectrum of molecular backgrounds and tumor types, with the greatest activity observed in patients with aberrations in the homologous recombination DNA damage repair pathway. Despite remarkable responses in a subset of patients, the response is usually modest and transient due to the almost inevitable emergence of resistance. Tumors develop resistance through rapid adaptation to the effects of PARPi as well as by generation or selection of genomic aberration. Although adaptive responses results in drug resistance, it also induces therapeutic vulnerabilities that could be exploited with rational combination therapies. To fulfill this role, we established the combinatorial adaptive response therapy (CART) platform by performing reverse-phase protein arrays to characterize adaptive responses, and develop rational combination therapies. Our series of studies strongly support the efficacy of this strategy, wherein targeting the emerging adaptive responses to PARPi with MEK/ERK inhibitors, WEE1/ATR inhibition (inhibitors of S-phase and G2 DNA damage checkpoint), and PI3K/AKT/mTOR inhibition, and showed promising anti-tumor activity in various preclinical models. Importantly, this approach has been proven highly efficient, and several combinational therapies developed from the CART platform are being evaluated in ongoing clinical trials (NCT03801369, NCT03586661, NCT03162627, NCT03544125, NCT02659241, NCT02208375, NCT02316834, and NCT03637491).
Insights
Poly (ADP-ribose) polymerase inhibitors (PARPi) show promise but often face resistance. Targeting adaptive resistance pathways with combination therapies, like those developed by the CART platform, can overcome this and improve anti-tumor activity.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Therapeutics
Background:
- Poly (ADP-ribose) polymerase inhibitors (PARPi) are effective against tumors with homologous recombination DNA repair defects.
- Tumor resistance to PARPi is a significant clinical challenge, often arising from adaptive responses.
- Adaptive resistance mechanisms create vulnerabilities exploitable by combination therapies.
Purpose of the Study:
- To establish a platform for characterizing adaptive responses to PARPi.
- To develop rational combination therapies targeting these adaptive responses.
- To evaluate the efficacy of combinatorial adaptive response therapy (CART) in preclinical cancer models.
Main Methods:
- Utilized reverse-phase protein arrays (RPPA) to profile adaptive responses to PARPi.
- Designed and tested combination therapies targeting key adaptive pathways.
- Assessed anti-tumor activity in various preclinical cancer models.
Main Results:
- The CART platform successfully identified adaptive resistance mechanisms.
- Combinations targeting MEK/ERK, WEE1/ATR, and PI3K/AKT/mTOR pathways showed significant anti-tumor activity.
- Preclinical efficacy supports the translation of CART-developed therapies to clinical trials.
Conclusions:
- Targeting adaptive resistance is a viable strategy to enhance PARPi efficacy.
- The CART platform provides a framework for developing effective combination cancer therapies.
- Several CART-developed combination therapies are advancing to clinical trials, demonstrating the platform's potential.
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