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Updated: Dec 22, 2025

A Complete Pipeline for Isolating and Sequencing MicroRNAs, and Analyzing Them Using Open Source Tools
Published on: August 21, 2019
Single-cell sequencing of miRNAs: A modified technology
Chiranjib Chakraborty1, Manojit Bhattacharya2, Govindasamy Agoramoorthy3
1Department of Biotechnology, School of Life Science and Biotechnology, Adamas University, Kolkata, West Bengal, India.
Next-generation sequencing enables single-cell miRNA analysis, crucial for understanding gene regulation. This review covers recent advancements in single-cell miRNA sequencing for epigenomics, genomics, and transcriptomics.
Area of Science:
- Molecular Biology
- Genomics
- Developmental Biology
Background:
- Next-generation sequencing (NGS) provides insights into individual cells.
- Single-cell RNA sequencing (scRNA-seq) has advanced cell mechanics exploration since 2009.
- MicroRNAs (miRNAs) are key regulators of gene expression.
Purpose of the Study:
- To review the latest advancements in single-cell miRNA sequencing.
- To highlight the importance of single-cell miRNA analysis for understanding cellular processes.
- To present comprehensive data on this emerging field.
Main Methods:
- Single-cell sequencing of miRNAs.
- Application of NGS technologies.
- Analysis of miRNA profiles in model organisms.
Main Results:
- Single-cell miRNA sequencing offers a deeper understanding of cellular epigenomics, genomics, and transcriptomics.
- Recent studies in Drosophila and Caenorhabditis elegans showcase the utility of this technology.
- miRNA sequencing at the single-cell level reveals complex gene regulation.
Conclusions:
- Single-cell miRNA sequencing is essential for deciphering cellular regulatory mechanisms.
- This technology opens new avenues for research in epigenomics, genomics, and transcriptomics.
- The review provides a comprehensive overview of current research and future directions.
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