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Minimal lactazole scaffold for in vitro thiopeptide bioengineering.
Alexander A Vinogradov1, Morito Shimomura2, Yuki Goto3
1Department of Chemistry, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, 113-0033, Japan.
Nature Communications
|May 10, 2020
Summary
Researchers developed an in vitro biosynthesis platform for lactazole A, a thiopeptide antibiotic. This system enables the creation of diverse lactazole analogs and hybrid thiopeptides, expanding chemical exploration.
Area of Science:
- Biochemistry
- Synthetic Biology
- Natural Product Biosynthesis
Background:
- Lactazole A is a cryptic thiopeptide produced by Streptomyces lactacystinaeus.
- Its biosynthesis is encoded by a 9.8 kb gene cluster.
- Thiopeptides represent a complex class of natural products with significant therapeutic potential.
Purpose of the Study:
- To establish an in vitro biosynthesis platform for lactazole A.
- To explore the substrate tolerance and engineering potential of lactazole biosynthetic enzymes.
- To generate diverse lactazole analogs and novel hybrid thiopeptides.
Main Methods:
- Development of the FIT-Laz system, combining flexible in vitro translation (FIT) with recombinant lactazole biosynthetic enzymes.
- Systematic dissection of the lactazole biosynthetic pathway.
- Engineering of the minimal lactazole scaffold for analog generation.
Main Results:
- Successful in vitro biosynthesis of lactazole A achieved.
- Demonstrated remarkable substrate tolerance of biosynthetic enzymes.
- Developed a minimal lactazole scaffold amenable to extensive modifications.
- Generated diverse lactazole analogs with mutations, varied macrocycle sizes, and extended tail regions.
- Created hybrid thiopeptides incorporating non-proteinogenic amino acids.
Conclusions:
- The FIT-Laz system provides a powerful platform for thiopeptide biosynthesis and engineering.
- The minimal lactazole scaffold facilitates the creation of novel thiopeptide structures.
- This approach opens avenues for exploring untapped chemical space within thiopeptides.
- Potential for discovering new therapeutic agents derived from thiopeptide scaffolds.

