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Updated: Dec 21, 2025

Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers
Published on: September 20, 2018
Using Chemical Epigenetics to Target Cancer
Virangika K Wimalasena1, Tingjian Wang2, Logan H Sigua1
1Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
Abstract:
Transcription is epigenetically regulated by the orchestrated function of chromatin-binding proteins that tightly control the expression of master transcription factors, effectors, and supportive housekeeping genes required for establishing and propagating the normal and malignant cell state. Rapid advances in chemical biology and functional genomics have facilitated exploration of targeting epigenetic proteins, yielding effective strategies to target transcription while reducing toxicities to untransformed cells. Here, we review recent developments in conventional active site and allosteric inhibitors, peptidomimetics, and novel proteolysis-targeted chimera (PROTAC) technology that have deepened our understanding of transcriptional processes and led to promising preclinical compounds for therapeutic translation, particularly in cancer.
Insights
Targeting epigenetic proteins offers new cancer therapies by controlling gene transcription. Advances in chemical biology and PROTAC technology yield promising preclinical compounds with reduced toxicity.
Area of Science:
- Molecular Biology
- Epigenetics
- Chemical Biology
Background:
- Transcription is epigenetically controlled by chromatin-binding proteins.
- These proteins regulate gene expression essential for normal and malignant cell states.
- Targeting epigenetic proteins is a promising therapeutic strategy, especially in oncology.
Purpose of the Study:
- To review recent advances in targeting epigenetic proteins for therapeutic translation.
- To explore novel strategies for modulating transcription with reduced toxicity.
- To highlight the potential of chemical biology and functional genomics in drug development.
Main Methods:
- Review of conventional active site and allosteric inhibitors.
- Exploration of peptidomimetics in epigenetic drug discovery.
- Analysis of proteolysis-targeted chimera (PROTAC) technology for targeting epigenetic proteins.
Main Results:
- Advances in chemical biology and functional genomics enable targeted epigenetic therapies.
- Development of effective strategies to modulate transcription with reduced off-target effects.
- Promising preclinical compounds identified through novel targeting approaches.
Conclusions:
- Targeting epigenetic regulators offers a viable therapeutic avenue, particularly for cancer treatment.
- Novel technologies like PROTACs are expanding the possibilities for epigenetic drug development.
- Continued research in chemical biology and functional genomics will drive therapeutic translation.
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