Fast detection and reduction of local transient artifacts in resting-state fMRI
Hang Joon Jo1, Richard C Reynolds2, Stephen J Gotts3
1Section on Functional Imaging Methods, Laboratory of Brain and Cognition, National Institute of Mental Health, National Institutes of Health, Bethesda, MD, USA; Department of Neurology, Mayo Clinic, Rochester, MN, USA; Department of Physiology, College of Medicine, Hanyang University, Seoul, South Korea.
Abstract:
Image quality control (QC) is a critical and computationally intensive component of functional magnetic resonance imaging (fMRI). Artifacts caused by physiologic signals or hardware malfunctions are usually identified and removed during data processing offline, well after scanning sessions are complete. A system with the computational efficiency to identify and remove artifacts during image acquisition would permit rapid adjustment of protocols as issues arise during experiments. To improve the speed and accuracy of QC and functional image correction, we developed Fast Anatomy-Based Image Correction (Fast ANATICOR) with newly implemented nuisance models and an improved pipeline. We validated its performance on a dataset consisting of normal scans and scans containing known hardware-driven artifacts. Fast ANATICOR's increased processing speed may make real-time QC and image correction feasible as compared with the existing offline method.
