Escape from the checkpoint: Nek2A binds a unique conformation of the APC/C-MCC complex
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Updated: Dec 21, 2025

Author Spotlight: Evaluating Biophysical Assays for Characterizing PROTACS Ternary Complexes
Published on: January 12, 2024
1The Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Abstract:
Cell division depends on the timely degradation of numerous proteins by the anaphase-promoting complex/cyclosome (APC/C). The APC/C is a large E3 ubiquitin ligase that in complex with Cdc20 recognises degrons in its substrates. The ability of APC/C-Cdc20 to bind degrons is prevented by the binding of the mitotic checkpoint complex (MCC) which constitutes the "wait anaphase" signal. Curiously, the mitotic kinase Nek2A is insensitive to the presence of the MCC. How Nek2A avoids MCC inhibition has been unclear but now work from Alfieri and colleagues published in this issue of EMBO reports provides an explanation [1]. It shows that Nek2A is able to bind a specific open conformation of the APC/C-MCC complex that allows Nek2A ubiquitination. A dimer of Nek2A binds two distinct binding pockets on the APC/C through C-terminal MR motifs and thus independently of degrons. One of the MR binding pockets is only available for interaction in the open form of APC/C-MCC explaining Nek2A selectivity for this conformation. Whether other substrates bind the APC/C directly without using canonical degrons will be important to determine.
Insights
The anaphase-promoting complex/cyclosome (APC/C) controls cell division. Nek2A kinase evades inhibition by the mitotic checkpoint complex (MCC) by binding an open APC/C-MCC conformation, enabling its ubiquitination.
Area of Science:
- Cellular biology
- Molecular mechanisms of cell division
- Protein degradation pathways
Background:
- Cell division relies on precise protein degradation orchestrated by the anaphase-promoting complex/cyclosome (APC/C).
- The APC/C, an E3 ubiquitin ligase, targets substrates via degrons when complexed with Cdc20.
- The mitotic checkpoint complex (MCC) inhibits APC/C-Cdc20, enforcing a 'wait anaphase' signal.
Discussion:
- The mitotic kinase Nek2A bypasses MCC inhibition, a previously unexplained phenomenon.
- Alfieri and colleagues reveal Nek2A binds a specific open conformation of the APC/C-MCC complex.
- This interaction allows Nek2A ubiquitination independently of canonical degrons.
Key Insights:
- Nek2A, as a dimer, utilizes C-terminal MR motifs to bind two distinct pockets on the APC/C.
- One binding pocket is accessible only in the open APC/C-MCC conformation, conferring Nek2A's selectivity.
- This mechanism explains how Nek2A avoids MCC-mediated inhibition during cell division.
Outlook:
- Investigating whether other APC/C substrates also bind directly, bypassing canonical degrons.
- Understanding the structural basis of Nek2A's interaction with the open APC/C-MCC conformation.
- Exploring the broader implications for cell cycle regulation and protein degradation control.
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