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Updated: Dec 21, 2025

Intestinal Epithelial Regeneration in Response to Ionizing Irradiation
Published on: July 27, 2022
Gut microbiota-derived indole 3-propionic acid protects against radiation toxicity via retaining acyl-CoA-binding
Hui-Wen Xiao1, Ming Cui2, Yuan Li1
1Tianjin Key Laboratory of Radiation Medicine and Molecular Nuclear Medicine, Institute of Radiation Medicine, Chinese Academy of Medical Sciences and Peking Union Medical College, 238 Baidi Road, Tianjin, 300192, China.
Background:
We have proved fecal microbiota transplantation (FMT) is an efficacious remedy to mitigate acute radiation syndrome (ARS); however, the mechanisms remain incompletely characterized. Here, we aimed to tease apart the gut microbiota-produced metabolites, underpin the therapeutic effects of FMT to radiation injuries, and elucidate the underlying molecular mechanisms.
Results:
FMT elevated the level of microbial-derived indole 3-propionic acid (IPA) in fecal pellets from irradiated mice. IPA replenishment via oral route attenuated hematopoietic system and gastrointestinal (GI) tract injuries intertwined with radiation exposure without precipitating tumor growth in male and female mice. Specifically, IPA-treated mice represented a lower system inflammatory level, recuperative hematogenic organs, catabatic myelosuppression, improved GI function, and epithelial integrity following irradiation. 16S rRNA gene sequencing and subsequent analyses showed that irradiated mice harbored a disordered enteric bacterial pattern, which was preserved after IPA administration. Notably, iTRAQ analysis presented that IPA replenishment retained radiation-reprogrammed protein expression profile in the small intestine. Importantly, shRNA interference and hydrodynamic-based gene delivery assays further validated that pregnane X receptor (PXR)/acyl-CoA-binding protein (ACBP) signaling played pivotal roles in IPA-favored radioprotection in vitro and in vivo.
Conclusions:
These evidences highlight that IPA is a key intestinal microbiota metabolite corroborating the therapeutic effects of FMT to radiation toxicity. Owing to the potential pitfalls of FMT, IPA might be employed as a safe and effective succedaneum to fight against accidental or iatrogenic ionizing ARS in clinical settings. Our findings also provide a novel insight into microbiome-based remedies toward radioactive diseases. Video abstract.
Insights
Indole 3-propionic acid (IPA), a gut microbial metabolite, mitigates radiation injury by preserving gut microbiota and activating PXR/ACBP signaling. IPA offers a potential alternative to fecal microbiota transplantation (FMT) for treating radiation toxicity.
Area of Science:
- Microbiology
- Radiology
- Metabolomics
Background:
- Fecal microbiota transplantation (FMT) effectively treats acute radiation syndrome (ARS), but its mechanisms are unclear.
- Investigating gut microbiota metabolites is crucial for understanding FMT's therapeutic effects on radiation injuries.
- Elucidating molecular mechanisms underlying FMT's efficacy in radiation protection is needed.
Purpose of the Study:
- To identify gut microbiota-produced metabolites responsible for FMT's therapeutic effects in radiation injury.
- To investigate the role of indole 3-propionic acid (IPA) in mitigating radiation-induced damage.
- To elucidate the molecular pathways involved in IPA-mediated radioprotection.
Main Methods:
- Fecal microbiota transplantation (FMT) in irradiated mice.
- Oral administration of indole 3-propionic acid (IPA).
- 16S rRNA gene sequencing, iTRAQ proteomics, shRNA interference, and gene delivery assays.
- Assessment of hematopoietic, gastrointestinal, and inflammatory markers.
Main Results:
- FMT increased fecal IPA levels; IPA replenishment attenuated radiation injuries in hematopoietic and gastrointestinal systems.
- IPA preserved gut microbiota composition and restored radiation-altered protein expression in the small intestine.
- Pregnane X receptor (PXR)/acyl-CoA-binding protein (ACBP) signaling was validated as critical for IPA's radioprotective effects.
Conclusions:
- Indole 3-propionic acid (IPA) is a key gut microbial metabolite mediating FMT's benefits against radiation toxicity.
- IPA presents a safe and effective alternative to FMT for managing accidental or iatrogenic radiation exposure.
- Findings offer novel insights into microbiome-based strategies for treating radiation-related diseases.
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