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Updated: Dec 21, 2025

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
Ubiquitin links smoothened to intraflagellar transport to regulate Hedgehog signaling
Paurav B Desai1, Michael W Stuck1, Bo Lv1
1Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA.
Abstract:
In the absence of Hedgehog ligand, patched-1 (Ptch1) localizes to cilia and prevents ciliary accumulation and activation of smoothened (Smo). Upon ligand binding, Ptch1 is removed from cilia, and Smo is derepressed and accumulates in cilia where it activates signaling. The mechanisms regulating these dynamic movements are not well understood, but defects in intraflagellar transport components, including Ift27 and the BBSome, cause Smo to accumulate in cilia without pathway activation. We find that in the absence of ligand-induced pathway activation, Smo is ubiquitinated and removed from cilia, and this process is dependent on Ift27 and BBSome components. Activation of Hedgehog signaling decreases Smo ubiquitination and ciliary removal, resulting in its accumulation. Blocking ubiquitination of Smo by an E1 ligase inhibitor or by mutating two lysine residues in intracellular loop three causes Smo to aberrantly accumulate in cilia without pathway activation. These data provide a mechanism to control Smo's ciliary level during Hedgehog signaling by regulating the ubiquitination state of the receptor.
Insights
Hedgehog pathway signaling regulates smoothened (Smo) protein levels in cilia. Ubiquitination controls Smo removal from cilia, preventing pathway activation without the Hedgehog ligand.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- The Hedgehog signaling pathway is crucial for development and disease.
- Patched-1 (Ptch1) and smoothened (Smo) are key receptors in this pathway.
- Regulation of Smo localization to cilia is critical for pathway activation.
Purpose of the Study:
- To elucidate the mechanisms controlling Smo's dynamic movement and localization within cilia.
- To investigate the role of ubiquitination in Smo regulation during Hedgehog signaling.
- To understand how intraflagellar transport components influence Smo ciliary levels.
Main Methods:
- Investigated Smo ubiquitination and ciliary removal in the absence and presence of Hedgehog ligand.
- Utilized E1 ligase inhibitors and site-directed mutagenesis to block Smo ubiquitination.
- Examined the dependence of Smo regulation on intraflagellar transport (IFT) components like Ift27 and the BBSome.
Main Results:
- Smo is ubiquitinated and removed from cilia in the absence of Hedgehog ligand, dependent on Ift27 and BBSome.
- Hedgehog pathway activation reduces Smo ubiquitination and promotes its ciliary accumulation.
- Inhibition of Smo ubiquitination leads to aberrant ciliary accumulation, uncoupled from pathway activation.
Conclusions:
- Smo ubiquitination state is a key regulator of its ciliary levels and Hedgehog pathway activation.
- Ubiquitination-dependent removal of Smo from cilia prevents pathway activation in the absence of ligand.
- These findings reveal a novel mechanism controlling Smo receptor dynamics via post-translational modification.
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