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Deep Multi-Scale 3D Convolutional Neural Network (CNN) for MRI Gliomas Brain Tumor Classification
Hiba Mzoughi1,2, Ines Njeh3,4, Ali Wali5
1Advanced Technologies for Medecine and Signal (ATMS), Sfax university, ENIS, Route de la Soukra km 4, 3038, Sfax, Tunisia. hiba.mzoughi@yahoo.fr.
Journal of Digital Imaging
|May 23, 2020
Summary
A novel deep learning model accurately classifies brain tumors using 3D MRI scans. This automated system distinguishes low-grade gliomas from high-grade gliomas with 96.49% accuracy, aiding clinical diagnosis.
Area of Science:
- Medical Imaging Analysis
- Artificial Intelligence in Radiology
- Neuro-oncology
Background:
- Accurate brain tumor grading is crucial for clinical diagnosis and treatment planning.
- Current methods often require manual analysis, which can be time-consuming and subjective.
- Volumetric 3D MRI offers rich data for automated analysis.
Purpose of the Study:
- To develop an efficient and fully automatic deep learning architecture for brain tumor classification.
- To distinguish between low-grade gliomas (LGG) and high-grade gliomas (HGG) using 3D MRI.
- To evaluate the impact of preprocessing and data augmentation on classification accuracy.
Main Methods:
- Proposed a deep multi-scale 3D convolutional neural network (CNN) architecture.
- Utilized volumetric T1-Gado MRI sequences for classification.
- Implemented intensity normalization, adaptive contrast enhancement, and data augmentation for preprocessing.
- Compared the 3D CNN with a 2D CNN variant.
Main Results:
- The proposed 3D CNN architecture effectively merged local and global contextual information.
- Preprocessing and data augmentation significantly improved classification accuracy.
- Achieved an overall accuracy of 96.49% on the Brats-2018 benchmark dataset.
- Outperformed recent state-of-the-art supervised and unsupervised approaches.
Conclusions:
- The developed deep multi-scale 3D CNN is a promising tool for automated brain tumor grading.
- Effective MRI preprocessing and data augmentation are essential for accurate CNN-based classification.
- The approach offers significant potential for assisting neuroradiologists in clinical diagnosis.

