A machine learning model that classifies breast cancer pathologic complete response on MRI post-neoadjuvant
Elizabeth J Sutton1, Natsuko Onishi2, Duc A Fehr3
1Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, USA. suttone@mskcc.org.
Breast Cancer Research : BCR
|May 30, 2020
Summary
This study developed a radiomics classifier to predict breast cancer pathologic complete response (pCR) after neoadjuvant chemotherapy (NAC) using MRI. The classifier accurately identifies pCR, potentially reducing the need for surgery in breast cancer patients.
Area of Science:
- Radiology and Medical Imaging
- Oncology
- Machine Learning in Medicine
Background:
- Pathologic complete response (pCR) in breast cancer after neoadjuvant chemotherapy (NAC) is crucial but cannot be assessed non-invasively.
- Current practice necessitates surgery for all patients to determine pCR, regardless of treatment response.
Purpose of the Study:
- To develop and validate a radiomics classifier for predicting breast cancer pCR on MRI after NAC.
- To enable non-invasive assessment of treatment response prior to surgical intervention.
Main Methods:
- Retrospective analysis of breast cancer patients (2014-2016) with pre- and post-NAC MRI and pathology reports.
- Automated radiomics analysis including segmentation, feature extraction, and recursive feature elimination random forest (RFE-RF) machine learning.
- Two models were trained: radiomics only (Model 1) and radiomics with molecular subtype (Model 2), addressing class imbalance with synthetic minority oversampling technique.
Main Results:
- The study included 278 invasive breast cancers; Model 1 achieved an Area Under the Receiver Operating Characteristic Curve (AUROC) of 0.83 in the test set.
- Model 2 (radiomics + molecular subtype) achieved an AUROC of 0.78 in the test set, showing similar accuracy to Model 1.
- No significant differences in pCR or molecular subtype were observed between training and test sets.
Conclusions:
- A validated radiomics classifier integrating radiomics features and molecular subtypes can accurately predict pCR on MRI post-NAC.
- This approach holds potential for non-invasive assessment of treatment response in breast cancer patients undergoing NAC.


