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Published on: June 7, 2018
Evaluating anthracycline cardiotoxicity associated single nucleotide polymorphisms in a paediatric cohort with early
Timothy N McOwan1,2, Lauren A Craig1, Anne Tripdayonis1
11Murdoch Children's Research Institute, The Royal Children's Hospital, Flemington Road, Parkville, Victoria 3052 Australia.
Background:
Anthracyclines are a mainstay of chemotherapy. However, a relatively frequent adverse outcome of anthracycline treatment is cardiomyopathy. Multiple genetic studies have begun to dissect the complex genetics underlying cardiac sensitivity to the anthracycline drug class. A number of single nucleotide polymorphisms (SNPs) have been identified to be in linkage disequilibrium with anthracycline induced cardiotoxicity in paediatric populations.
Methods:
Here we screened for the presence of SNPs resulting in a missense coding change in a cohort of children with early onset chemotherapy related cardiomyopathy. The SNP identity was evaluated by Sanger sequencing of PCR amplicons from genomic DNA of patients with anthracycline related cardiac dysfunction.
Results:
All of the published SNPs were observed within our patient group. There was no correlation between the number of missense variants an individual carried with severity of disease. Furthermore, the time to cardiac disease onset post-treatment was not greater in those individuals carrying a high load of SNPs resulting from missense variants.
Conclusions:
We conclude that previously identified missense SNPs are present within a paediatric cohort with early onset heart damage induced by anthracyclines. However, these SNPs require further replication cohorts and functional validation before being deployed to assess anthracycline cardiotoxicity risk in the clinic.
Insights
Previously identified single nucleotide polymorphisms (SNPs) linked to anthracycline cardiotoxicity were found in children with early-onset heart damage. However, these SNPs did not correlate with disease severity or onset time, requiring further validation.
Area of Science:
- Cardiology
- Genetics
- Oncology
Background:
- Anthracyclines are crucial chemotherapy agents but can cause cardiotoxicity.
- Genetic factors influence susceptibility to anthracycline-induced cardiomyopathy, particularly in pediatric patients.
- Single nucleotide polymorphisms (SNPs) have been associated with this adverse effect.
Purpose of the Study:
- To investigate the presence of missense coding SNPs in children experiencing early-onset chemotherapy-related cardiomyopathy.
- To evaluate the correlation between SNP load and the severity or onset of cardiac dysfunction.
Main Methods:
- Screened a cohort of children with early-onset cardiomyopathy for specific SNPs.
- Utilized Sanger sequencing of PCR amplicons from genomic DNA to identify SNP presence.
Main Results:
- All previously identified SNPs were present in the patient cohort.
- No correlation was found between the number of missense variants and disease severity.
- Carrying a high load of missense variants did not correlate with earlier onset of cardiac disease.
Conclusions:
- Previously identified missense SNPs are present in pediatric patients with anthracycline-induced cardiotoxicity.
- These SNPs require further replication and functional studies before clinical use for risk assessment.
- The current study highlights the need for more research into genetic markers for cardiotoxicity.
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