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Related Concept Videos

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Combining two or more treatment methods increases the life span of cancer patients while reducing damage to vital organs or tissue from the overuse of a single treatment. Combination therapy also targets different cancer-inducing pathways, thus reducing the chances of developing resistance to treatment.
The combination of the drug acetazolamide and sulforaphane is a good example of combination therapy to treat cancer. The cells in the interior of a large tumor often die due to the hypoxic and...
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Updated: Dec 20, 2025

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
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Developing a Search Engine for Precision Medicine.

Samuel J Shenoi1, Vi Ly2, Sarvesh Soni3

  • 1Baylor University, Waco, Texas.

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|June 2, 2020
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Summary
This summary is machine-generated.

Precision medicine aims to personalize cancer treatments. The PRIMROSE search engine helps oncologists find relevant research and clinical trials by analyzing patient data, improving information retrieval for better patient care.

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Area of Science:

  • Oncology
  • Bioinformatics
  • Medical Informatics

Background:

  • Precision medicine advances cancer treatment by tailoring therapies to individual genetic, environmental, and lifestyle factors.
  • Oncologists face challenges in accessing specific patient information due to the vast amount of medical data.
  • Efficient retrieval of relevant scientific articles and clinical trials is crucial for informed treatment decisions.

Purpose of the Study:

  • To develop the PRecIsion Medicine Robust Oncology Search Engine (PRIMROSE) for cancer patients.
  • To enhance information retrieval for oncologists by integrating patient-specific data.
  • To improve the accessibility and usability of precision oncology resources.

Main Methods:

  • Utilized Elasticsearch for efficient data storage and retrieval of scientific articles and clinical trials.
  • Developed a knowledge graph to expand search queries and improve information recall.
  • Experimented with machine learning and learning-to-rank models to optimize search relevance.
  • Created a ReactJS front-facing website and a REST API for user accessibility.

Main Results:

  • The PRIMROSE search engine effectively retrieves scientific literature and clinical trials based on detailed patient profiles.
  • Knowledge graph integration enhanced search recall, providing more comprehensive results.
  • Comparison of machine learning and learning-to-rank approaches informed further search engine optimization.
  • A user-friendly interface was developed for seamless access by healthcare providers.

Conclusions:

  • PRIMROSE offers a robust solution for navigating the complexities of precision oncology information.
  • The system facilitates better access to relevant research, supporting evidence-based clinical decision-making.
  • Integrating advanced search technologies improves the application of precision medicine in cancer care.